Difference between revisions of "Tiso gene 19184"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** probable_cytosolic_imp-gm...")
 
(Created page with "Category:Gene == Gene Tiso_gene_19184 == * right end position: ** 2270 * transcription direction: ** POSITIVE * left end position: ** 7 * centisome position: ** 0.27711797...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] ==
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== Gene Tiso_gene_19184 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2270
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* common name:
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* transcription direction:
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** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
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** POSITIVE
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** 5_deoxy_cytosolic_type_c_protein
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* left end position:
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** ORF
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** 7
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** 5_-nucleotidase
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* centisome position:
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* ec number:
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** 0.27711797   
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** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-12086]]
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** 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[XANTHOSINE]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 XMP[c] '''=>''' 1 xanthosine[c] '''+''' 1 phosphate[c]
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* Reaction: [[RXN-12579]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[TRIACYLGLYCEROL-LIPASE-RXN]]
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* [[Tiso_gene_14435]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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== Pathways associated ==
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* [[Tiso_gene_14434]]
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* [[LIPAS-PWY]]
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** IN-SILICO_ANNOTATION
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* [[PWY-6857]]
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***EC-NUMBER
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* [[Tiso_gene_14246]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6640]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6988]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5911]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_13929]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2270}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28530 28530]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=7}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02719 R02719]
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{{#set: centisome position=0.27711797    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
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{{#set: common name=ORF}}
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{{#set: common name=5_-nucleotidase}}
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{{#set: ec number=EC-3.1.3.5}}
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{{#set: gene associated=Tiso_gene_14435|Tiso_gene_14434|Tiso_gene_14246|Tiso_gene_6640|Tiso_gene_6988|Tiso_gene_5911|Tiso_gene_13929}}
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{{#set: in pathway=PWY-5695|PWY-6596}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:39, 21 March 2018

Gene Tiso_gene_19184

  • right end position:
    • 2270
  • transcription direction:
    • POSITIVE
  • left end position:
    • 7
  • centisome position:
    • 0.27711797
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19184&oldid=43000"