Difference between revisions of "3-ISOPROPYLMALDEHYDROG-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=R-3-Hydroxypalmitoyl-ACPs R-3-Hydroxypalmitoyl-ACPs] == * common name: ** a (3R)-3-hydroxypalmi...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALDEHYDROG-RXN 3-ISOPROPYLMALDEHYDROG-RXN] == * direction: ** REVERSIBLE * common name:...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=R-3-Hydroxypalmitoyl-ACPs R-3-Hydroxypalmitoyl-ACPs] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALDEHYDROG-RXN 3-ISOPROPYLMALDEHYDROG-RXN] ==
 +
* direction:
 +
** REVERSIBLE
 
* common name:
 
* common name:
−
** a (3R)-3-hydroxypalmitoyl-[acp]
+
** 3-isopropylmalate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
−
** a β-hydroxypalmitoyl-[acp]
+
** β-isopropylmalic enzyme
−
** a β-hydroxypalmitoyl-[acyl-carier-protein]
+
** threo-Ds-3-isopropylmalate dehydrogenase
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[4.2.1.61-RXN]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[NAD]][c] '''+''' 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7100]][c]
−
* [[RXN-9540]]
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1 NAD+[c] '''+''' 1 (2R,3S)-3-isopropylmalate[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 (2S)-2-isopropyl-3-oxosuccinate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_2920]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a (3R)-3-hydroxypalmitoyl-[acp]}}
+
* RHEA:
−
{{#set: common name=a &beta;-hydroxypalmitoyl-[acp]|a &beta;-hydroxypalmitoyl-[acyl-carier-protein]}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10892 10892]
−
{{#set: consumed by=4.2.1.61-RXN}}
+
* LIGAND-RXN:
−
{{#set: produced by=RXN-9540}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04426 R04426]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P05644 P05644]
 +
** [http://www.uniprot.org/uniprot/P05645 P05645]
 +
** [http://www.uniprot.org/uniprot/Q01987 Q01987]
 +
** [http://www.uniprot.org/uniprot/Q00412 Q00412]
 +
** [http://www.uniprot.org/uniprot/P08791 P08791]
 +
** [http://www.uniprot.org/uniprot/P30125 P30125]
 +
** [http://www.uniprot.org/uniprot/Q9PLW0 Q9PLW0]
 +
** [http://www.uniprot.org/uniprot/O66607 O66607]
 +
** [http://www.uniprot.org/uniprot/P12010 P12010]
 +
** [http://www.uniprot.org/uniprot/P04173 P04173]
 +
** [http://www.uniprot.org/uniprot/Q5SIY4 Q5SIY4]
 +
** [http://www.uniprot.org/uniprot/P24098 P24098]
 +
** [http://www.uniprot.org/uniprot/Q9JU79 Q9JU79]
 +
** [http://www.uniprot.org/uniprot/P43860 P43860]
 +
** [http://www.uniprot.org/uniprot/P41019 P41019]
 +
** [http://www.uniprot.org/uniprot/P54354 P54354]
 +
** [http://www.uniprot.org/uniprot/Q56268 Q56268]
 +
** [http://www.uniprot.org/uniprot/P29102 P29102]
 +
** [http://www.uniprot.org/uniprot/P37412 P37412]
 +
** [http://www.uniprot.org/uniprot/P23390 P23390]
 +
** [http://www.uniprot.org/uniprot/P29696 P29696]
 +
** [http://www.uniprot.org/uniprot/P41766 P41766]
 +
** [http://www.uniprot.org/uniprot/Q02143 Q02143]
 +
** [http://www.uniprot.org/uniprot/P34733 P34733]
 +
** [http://www.uniprot.org/uniprot/P50180 P50180]
 +
** [http://www.uniprot.org/uniprot/Q12591 Q12591]
 +
** [http://www.uniprot.org/uniprot/Q12590 Q12590]
 +
** [http://www.uniprot.org/uniprot/Q12592 Q12592]
 +
** [http://www.uniprot.org/uniprot/P07139 P07139]
 +
** [http://www.uniprot.org/uniprot/P41926 P41926]
 +
** [http://www.uniprot.org/uniprot/P48012 P48012]
 +
** [http://www.uniprot.org/uniprot/P87256 P87256]
 +
** [http://www.uniprot.org/uniprot/P87257 P87257]
 +
** [http://www.uniprot.org/uniprot/P73960 P73960]
 +
** [http://www.uniprot.org/uniprot/O86504 O86504]
 +
** [http://www.uniprot.org/uniprot/O85837 O85837]
 +
** [http://www.uniprot.org/uniprot/P18869 P18869]
 +
** [http://www.uniprot.org/uniprot/P34738 P34738]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=3-isopropylmalate dehydrogenase}}
 +
{{#set: common name=&beta;-isopropylmalic enzyme|threo-Ds-3-isopropylmalate dehydrogenase}}
 +
{{#set: gene associated=Tiso_gene_2920}}
 +
{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-athaliana|annotation-experimental_annotation|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:39, 21 March 2018

Reaction 3-ISOPROPYLMALDEHYDROG-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydrogenase
  • Synonym(s):
    • β-isopropylmalic enzyme
    • threo-Ds-3-isopropylmalate dehydrogenase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • LEUSYN-PWY, L-leucine biosynthesis: LEUSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6871, 3-methylbutanol biosynthesis (engineered): PWY-6871
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3-ISOPROPYLMALDEHYDROG-RXN&oldid=43012"