Difference between revisions of "RXN-13008"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1883 TAX-18...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13008 RXN-13008] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-ox...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13008 RXN-13008] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1883 TAX-1883]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33630 TAX-33630]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* common name:
 
* common name:
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** tetrapyrrole biosynthesis II (from glycine)
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** polyketide_synthase
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** 3-oxoacyl-(acyl-carrier-protein)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''3''' reaction(s) found
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* With identifiers:
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** [[UROGENIIISYN-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-OXO-EICOSAPENTAENOYL-ACP]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[3-HYDROXY-DOCOSAPENTAENOYL-ACP]][c]
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** [[OHMETHYLBILANESYN-RXN]]
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* With common name(s):
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** [[PORPHOBILSYNTH-RXN]]
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-docosapentaenoyl [acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxy-docosapentaenoyl-[acp][c]
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== Reaction(s) not found ==
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* '''1''' reaction(s) not found
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== Genes associated with this reaction  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=5-AMINOLEVULINIC-ACID-SYNTHASE-RXN 5-AMINOLEVULINIC-ACID-SYNTHASE-RXN]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9885]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_500]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13083]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1883}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33682}}
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{{#set: common name=polyketide_synthase}}
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{{#set: taxonomic range=TAX-33630}}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: taxonomic range=TAX-33208}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: common name=tetrapyrrole biosynthesis II (from glycine)}}
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{{#set: gene associated=Tiso_gene_9885|Tiso_gene_500|Tiso_gene_13083|Tiso_gene_10876|Tiso_gene_135|Tiso_gene_13394|Tiso_gene_136}}
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{{#set: reaction found=3}}
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{{#set: in pathway=}}
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{{#set: reaction not found=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:39, 21 March 2018

Reaction RXN-13008

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13008&oldid=43023"