Difference between revisions of "ASPARAGHYD-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** asparaginase * ec...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** asparaginase * ec...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[ASN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[L-ASPARTATE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 L-asparagine[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 L-aspartate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_19398]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ** [[ | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[Tiso_gene_17477]] | + | ** Source: [[orthology-synechocystis]] |
| − | ** [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | ** [[ | + | * Gene: [[Tiso_gene_17477]] |
| − | * [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | ** | + | ** Source: [[orthology-creinhardtii]] |
| − | + | * Gene: [[Tiso_gene_3570]] | |
| − | + | ** Source: [[orthology-esiliculosus]] | |
| − | ** [[ | + | ** Source: [[orthology-creinhardtii]] |
== Pathways == | == Pathways == | ||
* [[ASPARAGINE-DEG1-PWY]], L-asparagine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY ASPARAGINE-DEG1-PWY] | * [[ASPARAGINE-DEG1-PWY]], L-asparagine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY ASPARAGINE-DEG1-PWY] | ||
| Line 37: | Line 37: | ||
** '''2''' reactions found over '''3''' reactions in the full pathway | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]] | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-creinhardtii]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| − | ** | + | ** Source: [[orthology-synechocystis]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| − | * [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | ** [[ | + | *** Tool: [[pantograph]] |
| − | ** | + | * Category: [[annotation]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| Line 78: | Line 80: | ||
{{#set: ec number=EC-3.5.1.38}} | {{#set: ec number=EC-3.5.1.38}} | ||
{{#set: ec number=EC-3.5.1.1}} | {{#set: ec number=EC-3.5.1.1}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=Tiso_gene_19398|Tiso_gene_17477|Tiso_gene_3570}} |
{{#set: in pathway=ASPARAGINE-DEG1-PWY|ASPASN-PWY|ASPARAGINE-DEG1-PWY-1}} | {{#set: in pathway=ASPARAGINE-DEG1-PWY|ASPASN-PWY|ASPARAGINE-DEG1-PWY-1}} | ||
| − | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=orthology|annotation}} |
| − | + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus}} | |
| − | {{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
| − | + | ||
| − | {{#set: reconstruction tool=pathwaytools | + | |
| − | + | ||
Latest revision as of 19:39, 21 March 2018
Contents
Reaction ASPARAGHYD-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- asparaginase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ASN[c] + 1 WATER[c] => 1 AMMONIUM[c] + 1 L-ASPARTATE[c]
- With common name(s):
- 1 L-asparagine[c] + 1 H2O[c] => 1 ammonium[c] + 1 L-aspartate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_19398
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_17477
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
- Gene: Tiso_gene_3570
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
Pathways
- ASPARAGINE-DEG1-PWY, L-asparagine degradation I: ASPARAGINE-DEG1-PWY
- 1 reactions found over 1 reactions in the full pathway
- ASPASN-PWY, superpathway of L-aspartate and L-asparagine biosynthesis: ASPASN-PWY
- 4 reactions found over 7 reactions in the full pathway
- ASPARAGINE-DEG1-PWY-1, L-asparagine degradation III (mammalian): ASPARAGINE-DEG1-PWY-1
- 2 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-creinhardtii
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
