Difference between revisions of "DEOXY-D-RIBOSE-1-PHOSPHATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13008 RXN-13008] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-ox...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXY-D-RIBOSE-1-PHOSPHATE DEOXY-D-RIBOSE-1-PHOSPHATE] == * smiles: ** C1(C(O)C(CO)OC1OP(=O)([O...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13008 RXN-13008] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXY-D-RIBOSE-1-PHOSPHATE DEOXY-D-RIBOSE-1-PHOSPHATE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C1(C(O)C(CO)OC1OP(=O)([O-])[O-])
 
* common name:
 
* common name:
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** polyketide_synthase
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** 2-deoxy-α-D-ribose 1-phosphate
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** 3-oxoacyl-(acyl-carrier-protein)
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* inchi key:
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* ec number:
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** InChIKey=KBDKAJNTYKVSEK-VPENINKCSA-L
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** 212.096   
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
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* Synonym(s):
 
* Synonym(s):
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** deoxy-D-ribose 1-phosphate
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** 2-deoxy-D-ribose-1-phosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-OXO-EICOSAPENTAENOYL-ACP]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[3-HYDROXY-DOCOSAPENTAENOYL-ACP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[THYM-PHOSPH-RXN]]
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-docosapentaenoyl [acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxy-docosapentaenoyl-[acp][c]
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* [[URA-PHOSPH-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9885]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_500]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13083]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_10876]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_135]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_13394]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_136]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=polyketide_synthase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=23419734 23419734]
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
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* CHEMSPIDER:
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{{#set: ec number=EC-2.3.1.86}}
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** [http://www.chemspider.com/Chemical-Structure.10461471.html 10461471]
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{{#set: ec number=EC-2.3.1.85}}
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* CHEBI:
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{{#set: ec number=EC-1.1.1.100}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57259 57259]
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{{#set: gene associated=Tiso_gene_9885|Tiso_gene_500|Tiso_gene_13083|Tiso_gene_10876|Tiso_gene_135|Tiso_gene_13394|Tiso_gene_136}}
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* BIGG : 2dr1p
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{{#set: in pathway=}}
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* HMDB : HMDB01351
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: smiles=C1(C(O)C(CO)OC1OP(=O)([O-])[O-])}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: common name=2-deoxy-α-D-ribose 1-phosphate}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: inchi key=InChIKey=KBDKAJNTYKVSEK-VPENINKCSA-L}}
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{{#set: molecular weight=212.096    }}
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{{#set: common name=deoxy-D-ribose 1-phosphate|2-deoxy-D-ribose-1-phosphate}}
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{{#set: reversible reaction associated=THYM-PHOSPH-RXN|URA-PHOSPH-RXN}}

Latest revision as of 20:40, 21 March 2018

Metabolite DEOXY-D-RIBOSE-1-PHOSPHATE

  • smiles:
    • C1(C(O)C(CO)OC1OP(=O)([O-])[O-])
  • common name:
    • 2-deoxy-α-D-ribose 1-phosphate
  • inchi key:
    • InChIKey=KBDKAJNTYKVSEK-VPENINKCSA-L
  • molecular weight:
    • 212.096
  • Synonym(s):
    • deoxy-D-ribose 1-phosphate
    • 2-deoxy-D-ribose-1-phosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C1(C(O)C(CO)OC1OP(=O)([O-])[O-])" cannot be used as a page name in this wiki.



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