Difference between revisions of "CPD-10284"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9528 RXN-9528] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-decanoyl-[acyl-carrier...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10284 CPD-10284] == * smiles: ** CCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9528 RXN-9528] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-10284 CPD-10284] ==
* direction:
+
* smiles:
** LEFT-TO-RIGHT
+
** CCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
 
* common name:
 
* common name:
** 3-oxo-decanoyl-[acyl-carrier protein] reductase
+
** 3-oxo-myristoyl-CoA
** polyketide_synthase
+
* inchi key:
** 3-oxoacyl-(acyl-carrier-protein)
+
** InChIKey=IQNFBGHLIVBNOU-QSGBVPJFSA-J
* ec number:
+
* molecular weight:
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** 987.845   
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** 3-oxotetradecanoyl-CoA
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
* [[RXN-14268]]
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-oxo-decanoyl-ACPs]][c] '''=>''' 1 [[Beta-hydroxydecanoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
== Reaction(s) known to produce the compound ==
* With common name(s):
+
* [[RXN-12507]]
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a 3-oxo-decanoyl-[acp][c] '''=>''' 1 a (3R)-3-hydroxydecanoyl-[acp][c] '''+''' 1 NADP+[c]
+
== Reaction(s) of unknown directionality ==
 
+
* [[ACACT6]]
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* [[Tiso_gene_10415]]
+
** [[pantograph]]-[[synechocystis]]
+
* [[Tiso_gene_135]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_13394]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_10876]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_13083]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
** EXPERIMENTAL_ANNOTATION
+
***EC-NUMBER
+
** [[pantograph]]-[[synechocystis]]
+
** [[pantograph]]-[[esiliculosus]]
+
* [[Tiso_gene_136]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_9885]]
+
** EXPERIMENTAL_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_624]]
+
** [[pantograph]]-[[synechocystis]]
+
* [[Tiso_gene_500]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
* [[Tiso_gene_16579]]
+
** [[pantograph]]-[[synechocystis]]
+
== Pathways  ==
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
** '''31''' reactions found over '''31''' reactions in the full pathway
+
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
** '''31''' reactions found over '''31''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[orthology]]
+
** Source: [[orthology-synechocystis]]
+
*** Tool: [[pantograph]]
+
** Source: [[orthology-esiliculosus]]
+
*** Tool: [[pantograph]]
+
* Category: [[manual]]
+
** Source: [[manual-primary_network]]
+
* Category: [[annotation]]
+
** Source: [[annotation-experimental_annotation]]
+
*** Tool: [[pathwaytools]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIGAND-CPD:
{{#set: common name=3-oxo-decanoyl-[acyl-carrier protein] reductase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C05261 C05261]
{{#set: common name=polyketide_synthase}}
+
* HMDB : HMDB03935
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
+
* CHEBI:
{{#set: ec number=EC-2.3.1.86}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62543 62543]
{{#set: ec number=EC-2.3.1.85}}
+
* BIGG : 3otdcoa
{{#set: ec number=EC-1.1.1.100}}
+
* PUBCHEM:
{{#set: gene associated=Tiso_gene_10415|Tiso_gene_135|Tiso_gene_13394|Tiso_gene_10876|Tiso_gene_13083|Tiso_gene_136|Tiso_gene_9885|Tiso_gene_624|Tiso_gene_500|Tiso_gene_16579}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245316 25245316]
{{#set: in pathway=PWY-5971|PWY-5994}}
+
{{#set: smiles=CCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: common name=3-oxo-myristoyl-CoA}}
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
+
{{#set: inchi key=InChIKey=IQNFBGHLIVBNOU-QSGBVPJFSA-J}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: molecular weight=987.845    }}
 +
{{#set: common name=3-oxotetradecanoyl-CoA}}
 +
{{#set: consumed by=RXN-14268}}
 +
{{#set: produced by=RXN-12507}}
 +
{{#set: reversible reaction associated=ACACT6}}

Latest revision as of 20:40, 21 March 2018

Metabolite CPD-10284

  • smiles:
    • CCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • common name:
    • 3-oxo-myristoyl-CoA
  • inchi key:
    • InChIKey=IQNFBGHLIVBNOU-QSGBVPJFSA-J
  • molecular weight:
    • 987.845
  • Synonym(s):
    • 3-oxotetradecanoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.