Difference between revisions of "DAPASYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYM-PHOSPH-RXN THYM-PHOSPH-RXN] == * direction: ** REVERSIBLE * common name: ** thymidine_phosphor...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DAPASYN-RXN DAPASYN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYM-PHOSPH-RXN THYM-PHOSPH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DAPASYN-RXN DAPASYN-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** thymidine_phosphorylase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.2.2 EC-2.4.2.2]
+
** [http://enzyme.expasy.org/EC/2.6.1.62 EC-2.6.1.62]
−
** [http://enzyme.expasy.org/EC/2.4.2.4 EC-2.4.2.4]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Pi]][c] '''+''' 1 [[THYMIDINE]][c] '''<=>''' 1 [[THYMINE]][c] '''+''' 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[8-AMINO-7-OXONONANOATE]][c] '''<=>''' 1 [[S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE]][c] '''+''' 1 [[DIAMINONONANOATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 phosphate[c] '''+''' 1 thymidine[c] '''<=>''' 1 thymine[c] '''+''' 1 2-deoxy-&alpha;-D-ribose 1-phosphate[c]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 8-amino-7-oxononanoate[c] '''<=>''' 1 S-adenosyl-4-methylthio-2-oxobutanoate[c] '''+''' 1 7,8-diaminopelargonate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_1011]]
+
* Gene: [[Tiso_gene_11635]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-athaliana]]
−
*** Assignment: EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7181]], pyrimidine deoxyribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7181 PWY-7181]
+
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-in-silico_annotation]]
+
** Source: [[orthology-athaliana]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16037 16037]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16861 16861]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01570 R01570]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03231 R03231]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P47717 P47717]
+
** [http://www.uniprot.org/uniprot/Q58696 Q58696]
−
** [http://www.uniprot.org/uniprot/Q58081 Q58081]
+
** [http://www.uniprot.org/uniprot/P53555 P53555]
−
** [http://www.uniprot.org/uniprot/P47297 P47297]
+
** [http://www.uniprot.org/uniprot/P44426 P44426]
−
** [http://www.uniprot.org/uniprot/P19971 P19971]
+
** [http://www.uniprot.org/uniprot/Q9JV96 Q9JV96]
−
** [http://www.uniprot.org/uniprot/P19663 P19663]
+
** [http://www.uniprot.org/uniprot/Q9PIJ2 Q9PIJ2]
−
** [http://www.uniprot.org/uniprot/P07650 P07650]
+
** [http://www.uniprot.org/uniprot/P46395 P46395]
−
** [http://www.uniprot.org/uniprot/P75052 P75052]
+
** [http://www.uniprot.org/uniprot/P53656 P53656]
 +
** [http://www.uniprot.org/uniprot/P22805 P22805]
 +
** [http://www.uniprot.org/uniprot/P45488 P45488]
 +
** [http://www.uniprot.org/uniprot/P12995 P12995]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=thymidine_phosphorylase}}
+
{{#set: ec number=EC-2.6.1.62}}
−
{{#set: ec number=EC-2.4.2.2}}
+
{{#set: gene associated=Tiso_gene_11635}}
−
{{#set: ec number=EC-2.4.2.4}}
+
{{#set: in pathway=PWY0-1507}}
−
{{#set: gene associated=Tiso_gene_1011}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=PWY-7181}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:40, 21 March 2018

Reaction DAPASYN-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I: PWY0-1507
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DAPASYN-RXN&oldid=43114"