Difference between revisions of "RXN-12610"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROFOLATE-GLU-N DIHYDROFOLATE-GLU-N] == * common name: ** a 7,8-dihydrofolate * Synonym(s):...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12610 RXN-12610] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** thiamine_monophospha...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12610 RXN-12610] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** ORF |
| + | ** thiamine_monophosphate_synthase | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.5.1.3 EC-2.5.1.3] | ||
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | == | + | ** 2 [[PROTON]][c] '''+''' 1 [[CPD-13576]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''=>''' 1 [[THIAMINE-P]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
| − | * [[ | + | * With common name(s): |
| − | == | + | ** 2 H+[c] '''+''' 1 2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate[c] '''+''' 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] '''=>''' 1 thiamine phosphate[c] '''+''' 1 diphosphate[c] '''+''' 1 CO2[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_2159]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_10320]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_2160]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-6907]], thiamine diphosphate biosynthesis III (Staphylococcus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6907 PWY-6907] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-6893]], thiamine diphosphate biosynthesis II (Bacillus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6893 PWY-6893] | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: common name= | + | {{#set: common name=ORF}} |
| − | {{#set: | + | {{#set: common name=thiamine_monophosphate_synthase}} |
| − | {{#set: | + | {{#set: ec number=EC-2.5.1.3}} |
| + | {{#set: gene associated=Tiso_gene_2159|Tiso_gene_10320|Tiso_gene_2160}} | ||
| + | {{#set: in pathway=PWY-6907|PWY-6893}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:40, 21 March 2018
Contents
Reaction RXN-12610
- direction:
- LEFT-TO-RIGHT
- common name:
- ORF
- thiamine_monophosphate_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 PROTON[c] + 1 CPD-13576[c] + 1 AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP[c] => 1 THIAMINE-P[c] + 1 PPI[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 2 H+[c] + 1 2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate[c] + 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] => 1 thiamine phosphate[c] + 1 diphosphate[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_2159
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_10320
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_2160
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-6907, thiamine diphosphate biosynthesis III (Staphylococcus): PWY-6907
- 3 reactions found over 3 reactions in the full pathway
- PWY-6893, thiamine diphosphate biosynthesis II (Bacillus): PWY-6893
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
