Difference between revisions of "HEME-BIOSYNTHESIS-II"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATEDEHYDROG-RXN PREPHENATEDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAG...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATEDEHYDROG-RXN PREPHENATEDEHYDROG-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://enzyme.expasy.org/EC/1.3.1.12 EC-1.3.1.12]
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* common name:
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** heme biosynthesis I (aerobic)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
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** 1 [[NAD]][c] '''+''' 1 [[PREPHENATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c]
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* [[PROTOHEMEFERROCHELAT-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 NAD+[c] '''+''' 1 prephenate[c] '''=>''' 1 CO2[c] '''+''' 1 NADH[c] '''+''' 1 4-hydroxyphenylpyruvate[c]
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*** [[Tiso_gene_3284]]
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*** [[Tiso_gene_15900]]
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== Genes associated with this reaction  ==
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** 6 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-experimental_annotation]]
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* [[PWY-7303]], 3-dimethylallyl-4-hydroxybenzoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7303 PWY-7303]
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*** [[orthology-esiliculosus]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
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* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
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*** [[orthology-athaliana]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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*** [[orthology-synechocystis]]
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== Reconstruction information  ==
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*** [[orthology-creinhardtii]]
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* Category: [[manual]]
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* [[PROTOPORGENOXI-RXN]]
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** Source: [[manual-primary_network]]
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** 2 associated gene(s):
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*** [[Tiso_gene_11986]]
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*** [[Tiso_gene_15401]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[RXN0-1461]]
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** 5 associated gene(s):
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*** [[Tiso_gene_3671]]
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*** [[Tiso_gene_2247]]
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*** [[Tiso_gene_13364]]
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*** [[Tiso_gene_13365]]
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*** [[Tiso_gene_2246]]
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** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[UROGENDECARBOX-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_18743]]
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*** [[Tiso_gene_19684]]
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*** [[Tiso_gene_18744]]
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*** [[Tiso_gene_5173]]
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** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13869 13869]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
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* LIGAND-RXN:
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* SGD-PATHWAY : HEME-BIOSYNTHESIS-II
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** [http://www.genome.jp/dbget-bin/www_bget?R01728 R01728]
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* HUMANCYC : HEME-BIOSYNTHESIS-II
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* UNIPROT:
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* PLASMOCYC : HEME-BIOSYNTHESIS-II
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** [http://www.uniprot.org/uniprot/Q9CET9 Q9CET9]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/Q9PIZ7 Q9PIZ7]
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.uniprot.org/uniprot/P43902 P43902]
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{{#set: common name=heme biosynthesis I (aerobic)}}
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** [http://www.uniprot.org/uniprot/P07023 P07023]
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{{#set: reaction found=4}}
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** [http://www.uniprot.org/uniprot/Q04983 Q04983]
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{{#set: total reaction=4}}
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** [http://www.uniprot.org/uniprot/Q02287 Q02287]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P43901 P43901]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.3.1.12}}
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{{#set: in pathway=PWY-7303|TYRSYN}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=manual-primary_network}}
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Latest revision as of 19:41, 21 March 2018

Pathway HEME-BIOSYNTHESIS-II

  • taxonomic range:
  • common name:
    • heme biosynthesis I (aerobic)
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

  • ECOCYC:
  • SGD-PATHWAY : HEME-BIOSYNTHESIS-II
  • HUMANCYC : HEME-BIOSYNTHESIS-II
  • PLASMOCYC : HEME-BIOSYNTHESIS-II




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