Difference between revisions of "RXN-11520"

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(Created page with "Category:Gene == Gene Tiso_gene_1366 == * left end position: ** 6843 * transcription direction: ** NEGATIVE * right end position: ** 8852 * centisome position: ** 28.45795...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_1366 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] ==
* left end position:
+
* direction:
** 6843
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** LEFT-TO-RIGHT
* transcription direction:
+
** NEGATIVE
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* right end position:
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** 8852
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* centisome position:
+
** 28.457954   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[3.6.3.50-RXN]]
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* With identifiers:
** [[pantograph]]-[[esiliculosus]]
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** 1 [[WATER]][c] '''+''' 1 [[1-7-DIMETHYLXANTHINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-12483]][c]
* [[ATPASE-RXN]]
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* With common name(s):
** [[pantograph]]-[[athaliana]]
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** 1 H2O[c] '''+''' 1 paraxanthine[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 1,7-dimethylurate[c]
* [[ATPSYN-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
***ec-number
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Genes have been associated with this reaction based on different elements listed below.
** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_11775]]
* [[TRANS-RXN-249]]
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** Source: [[orthology-athaliana]]
** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
== Pathways associated ==
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* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
* [[PWY-7219]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=6843}}
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* LIGAND-RXN:
{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07977 R07977]
{{#set: right end position=8852}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=28.457954    }}
+
{{#set: gene associated=Tiso_gene_11775}}
{{#set: reaction associated=3.6.3.50-RXN|ATPASE-RXN|ATPSYN-RXN|TRANS-RXN-249}}
+
{{#set: in pathway=PWY-6632}}
{{#set: pathway associated=PWY-7219}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:41, 21 March 2018

Reaction RXN-11520

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6632, caffeine degradation IV (bacteria, via demethylation and oxidation): PWY-6632
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links