Difference between revisions of "RXN66-313"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5331 PWY-5331] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-313 RXN66-313] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5331 PWY-5331] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-313 RXN66-313] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/1.1.1.170 EC-1.1.1.170]
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** taurine biosynthesis
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* Synonym(s):
 
* Synonym(s):
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** L-cysteine degradation IV
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[CYSTEAMINE-DIOXYGENASE-RXN]]
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** 1 [[CPD-4577]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[CPD-4578]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_9748]]
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** 1 4α-carboxy-4β-methyl-5α-cholesta-8,24-dien-3β-ol[c] '''+''' 1 NAD(P)+[c] '''=>''' 1 CO2[c] '''+''' 1 NAD(P)H[c] '''+''' 1 3-dehydro-4-methylzymosterol[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[CYSTEINE-DIOXYGENASE-RXN]]
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* Gene: [[Tiso_gene_897]]
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** 1 associated gene(s):
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** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_1457]]
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== Pathways  ==
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** 3 reconstruction source(s) associated:
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* [[PWY66-341]], cholesterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-341 PWY66-341]
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*** [[annotation-in-silico_annotation]]
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** '''8''' reactions found over '''22''' reactions in the full pathway
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*** [[orthology-creinhardtii]]
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* [[PWY-6074]], zymosterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6074 PWY-6074]
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*** [[orthology-esiliculosus]]
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** '''4''' reactions found over '''12''' reactions in the full pathway
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== Reaction(s) not found ==
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* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
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* [http://metacyc.org/META/NEW-IMAGE?object=HYPOTAURINE-DEHYDROGENASE-RXN HYPOTAURINE-DEHYDROGENASE-RXN]
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** '''7''' reactions found over '''22''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=SULFINOALANINE-DECARBOXYLASE-RXN SULFINOALANINE-DECARBOXYLASE-RXN]
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* RHEA:
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{{#set: taxonomic range=TAX-40674}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33448 33448]
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{{#set: common name=taurine biosynthesis}}
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* LIGAND-RXN:
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{{#set: common name=L-cysteine degradation IV}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07494 R07494]
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{{#set: reaction found=2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=4}}
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{{#set: ec number=EC-1.1.1.170}}
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{{#set: completion rate=50.0}}
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{{#set: gene associated=Tiso_gene_897}}
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{{#set: in pathway=PWY66-341|PWY-6074|PWY66-4}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:41, 21 March 2018

Reaction RXN66-313

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-341, cholesterol biosynthesis I: PWY66-341
    • 8 reactions found over 22 reactions in the full pathway
  • PWY-6074, zymosterol biosynthesis: PWY-6074
    • 4 reactions found over 12 reactions in the full pathway
  • PWY66-4, cholesterol biosynthesis III (via desmosterol): PWY66-4
    • 7 reactions found over 22 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN66-313&oldid=43253"