Difference between revisions of "Tiso gene 4406"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.180-RXN 2.3.1.180-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-car...")
 
(Created page with "Category:Gene == Gene Tiso_gene_4406 == * right end position: ** 14449 * transcription direction: ** NEGATIVE * left end position: ** 13527 * centisome position: ** 47.801...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.180-RXN 2.3.1.180-RXN] ==
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== Gene Tiso_gene_4406 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 14449
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* common name:
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* transcription direction:
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** 3-oxoacyl-(acyl-carrier-protein)_synthase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.3.1.180 EC-2.3.1.180]
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** 13527
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* centisome position:
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** 47.801964   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[THREONINE--TRNA-LIGASE-RXN]]
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** 1 [[ACETYL-COA]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Acetoacetyl-ACPs]][c] '''+''' 1 [[CO-A]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 acetyl-CoA[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 an acetoacetyl-[acp][c] '''+''' 1 coenzyme A[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[TRNA-CHARGING-PWY]]
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* [[Tiso_gene_15991]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-4381]], fatty acid biosynthesis initiation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=14449}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12083 12083]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=13527}}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)_synthase}}
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{{#set: centisome position=47.801964    }}
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{{#set: ec number=EC-2.3.1.180}}
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{{#set: reaction associated=THREONINE--TRNA-LIGASE-RXN}}
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{{#set: gene associated=Tiso_gene_15991}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: in pathway=PWY-4381}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:42, 21 March 2018

Gene Tiso_gene_4406

  • right end position:
    • 14449
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 13527
  • centisome position:
    • 47.801964
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4406&oldid=43292"