Difference between revisions of "PWY-6317"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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** [http://enzyme.expasy.org/EC/1.13.11.59 EC-1.13.11.59]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** D-galactose degradation I (Leloir pathway)
 
* Synonym(s):
 
* Synonym(s):
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** Leloir pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''5''' reactions in the full pathway
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** 1 [[CPD-7953]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[PRENAL]][c] '''+''' 1 [[CPD-12935]][c]
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* [[ALDOSE1EPIM-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 torulene[c] '''+''' 1 oxygen[c] '''=>''' 1 3-methyl-2-butenal[c] '''+''' 1 4'-apo-β-carotenal[c]
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*** [[Tiso_gene_17734]]
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*** [[Tiso_gene_19779]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_4653]]
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*** [[annotation-experimental_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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* [[GALACTOKIN-RXN]]
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* [[Tiso_gene_7740]]
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** 5 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_11795]]
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== Pathways  ==
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*** [[Tiso_gene_12191]]
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* [[PWY-6681]], neurosporaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6681 PWY-6681]
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*** [[Tiso_gene_5041]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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*** [[Tiso_gene_10797]]
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== Reconstruction information  ==
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*** [[Tiso_gene_5042]]
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* Category: [[orthology]]
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** 5 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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* [[GALACTURIDYLYLTRANS-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_2435]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PHOSPHOGLUCMUT-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_4816]]
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*** [[Tiso_gene_13477]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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* [[UDPGLUCEPIM-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_9823]]
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*** [[Tiso_gene_15395]]
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*** [[Tiso_gene_3236]]
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*** [[Tiso_gene_10797]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31522 31522]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=GALACTMETAB-PWY GALACTMETAB-PWY]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: ec number=EC-1.13.11.59}}
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{{#set: taxonomic range=TAX-3193}}
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{{#set: gene associated=Tiso_gene_4653|Tiso_gene_7740}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: in pathway=PWY-6681}}
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{{#set: common name=D-galactose degradation I (Leloir pathway)}}
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{{#set: reconstruction category=orthology}}
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{{#set: common name=Leloir pathway}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reaction found=5}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: total reaction=5}}
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{{#set: completion rate=100.0}}

Latest revision as of 19:42, 21 March 2018

Pathway PWY-6317

  • taxonomic range:
  • common name:
    • D-galactose degradation I (Leloir pathway)
  • Synonym(s):
    • Leloir pathway

Reaction(s) found

5 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6317&oldid=43305"