Difference between revisions of "PWY-5078"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12088 RXN-12088] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha-galactosidase * ec nu...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5078 PWY-5078] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12088 RXN-12088] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5078 PWY-5078] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
** alpha-galactosidase
+
** L-isoleucine degradation II
* ec number:
+
** [http://enzyme.expasy.org/EC/3.2.1.22 EC-3.2.1.22]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** Ehrlich pathway
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''2''' reactions found over '''3''' reactions in the full pathway
** 1 [[Alpha-D-Galactosides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Non-Galactosylated-Galactose-Acceptors]][c] '''+''' 1 [[ALPHA-D-GALACTOSE]][c]
+
* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
* With common name(s):
+
** 3 associated gene(s):
** 1 an α-D-galactoside[c] '''+''' 1 H2O[c] '''=>''' 1 a non galactosylated galactose acceptor[c] '''+''' 1 α-D-galactose[c]
+
*** [[Tiso_gene_14984]]
 
+
*** [[Tiso_gene_18403]]
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_17748]]
Genes have been associated with this reaction based on different elements listed below.
+
** 7 reconstruction source(s) associated:
* [[Tiso_gene_16101]]
+
*** [[annotation-experimental_annotation]]
** [[pantograph]]-[[esiliculosus]]
+
*** [[orthology-esiliculosus]]
* [[Tiso_gene_8673]]
+
*** [[annotation-in-silico_annotation]]
** [[pantograph]]-[[esiliculosus]]
+
*** [[orthology-athaliana]]
* [[Tiso_gene_3392]]
+
*** [[orthology-synechocystis]]
** IN-SILICO_ANNOTATION
+
*** [[manual-primary_network]]
***AUTOMATED-NAME-MATCH
+
*** [[orthology-creinhardtii]]
* [[Tiso_gene_4615]]
+
* [[RXN-7694]]
** IN-SILICO_ANNOTATION
+
** 5 associated gene(s):
***AUTOMATED-NAME-MATCH
+
*** [[Tiso_gene_5425]]
== Pathways  ==
+
*** [[Tiso_gene_7649]]
== Reconstruction information  ==
+
*** [[Tiso_gene_6562]]
* [[orthology]]:
+
*** [[Tiso_gene_5424]]
** [[pantograph]]:
+
*** [[Tiso_gene_6563]]
*** [[esiliculosus]]
+
** 1 reconstruction source(s) associated:
* [[annotation]]:
+
*** [[annotation-in-silico_annotation]]
** [[pathwaytools]]:
+
== Reaction(s) not found ==
*** [[in-silico_annotation]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.72-RXN 4.1.1.72-RXN]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-4751}}
{{#set: common name=alpha-galactosidase}}
+
{{#set: common name=L-isoleucine degradation II}}
{{#set: ec number=EC-3.2.1.22}}
+
{{#set: common name=Ehrlich pathway}}
{{#set: gene associated=Tiso_gene_16101|Tiso_gene_8673|Tiso_gene_3392|Tiso_gene_4615}}
+
{{#set: reaction found=2}}
{{#set: in pathway=}}
+
{{#set: total reaction=3}}
{{#set: reconstruction category=orthology}}
+
{{#set: completion rate=67.0}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:42, 21 March 2018

Pathway PWY-5078

  • taxonomic range:
  • common name:
    • L-isoleucine degradation II
  • Synonym(s):
    • Ehrlich pathway

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links