Difference between revisions of "FGFTm"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2161 RXN0-2161] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** structural_maintenan...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FGFTm FGFTm] == * direction: ** LEFT-TO-RIGHT * common name: ** N2-Formyl-N1-(5-phospho-D-ribosyl)g...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2161 RXN0-2161] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FGFTm FGFTm] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide formyltransferase, mitochondria
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** structural_maintenance_of_chromosomes_protein_6
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/6.1.1.11 EC-6.1.1.11]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[tRNA-Sec]][c] '''+''' 1 [[SER]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[L-seryl-SEC-tRNAs]][c] '''+''' 1 [[AMP]][c]
+
** 1.0 [[THF]][m] '''+''' 1.0 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][m] '''+''' 3.0 [[PROTON]][m] '''=>''' 1.0 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][m] '''+''' 1.0 [[WATER]][m] '''+''' 1.0 [[5-10-METHENYL-THF]][m]
 
* With common name(s):
 
* With common name(s):
−
** 1 a tRNAsec[c] '''+''' 1 L-serine[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-seryl-[tRNAsec][c] '''+''' 1 AMP[c]
+
** 1.0 tetrahydropteroyl mono-L-glutamate[m] '''+''' 1.0 N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide[m] '''+''' 3.0 H+[m] '''=>''' 1.0 N1-(5-phospho-β-D-ribosyl)glycinamide[m] '''+''' 1.0 H2O[m] '''+''' 1.0 5,10-methenyltetrahydrofolate mono-L-glutamate[m]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1682]]
+
* Gene: [[Tiso_gene_1369]]
−
** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10015]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_1684]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_587]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-901 PWY0-901]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08218 R08218]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide formyltransferase, mitochondria}}
−
{{#set: common name=structural_maintenance_of_chromosomes_protein_6}}
+
{{#set: gene associated=Tiso_gene_1369}}
−
{{#set: ec number=EC-6.1.1.11}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Tiso_gene_1682|Tiso_gene_10015|Tiso_gene_1684|Tiso_gene_587}}
+
−
{{#set: in pathway=PWY0-901|PWY-6281}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 20:42, 21 March 2018

Reaction FGFTm

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide formyltransferase, mitochondria
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=FGFTm&oldid=43364"