Difference between revisions of "PWY-6443"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYLGERANYL-PP GERANYLGERANYL-PP] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6443 PWY-6443] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYLGERANYL-PP GERANYLGERANYL-PP] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6443 PWY-6443] ==
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* smiles:
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* taxonomic range:
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** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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* inchi key:
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** InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K
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* common name:
 
* common name:
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** geranylgeranyl diphosphate
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** benzoate biosynthesis I (CoA-dependent, β-oxidative)
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* molecular weight:
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** 447.424   
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* Synonym(s):
 
* Synonym(s):
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** all-trans-geranyl-geranyl-pp
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** benzoic acid biosynthesis
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** geranylgeranyl-PP
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** GGPP
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** geranylgeranyl diphosphate
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** (2E,6E,10E)-geranylgeranyl diphosphate
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** ω,E,E,E-geranylgeranyl diphosphate
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** (2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate
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** all-trans-geranylgeranyl diphosphate
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** 2-trans,6-trans,10-trans-geranylgeranyl diphosphate
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[RXN-7663]]
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'''2''' reactions found over '''9''' reactions in the full pathway
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* [[2.5.1.32-RXN]]
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* [[PWY-6457]]
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* [[RXN-11486]]
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** 0 associated gene:
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* [[RXN-10625]]
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* [[RXN-2006]]
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== Reaction(s) known to produce the compound ==
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** 1 associated gene(s):
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* [[GGPS]]
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*** [[Tiso_gene_16181]]
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* [[FARNESYLTRANSTRANSFERASE-RXN]]
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** 2 reconstruction source(s) associated:
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== Reaction(s) of unknown directionality ==
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*** [[orthology-athaliana]]
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* [[RXN-7673]]
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*** [[orthology-esiliculosus]]
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* [[RXN-7658]]
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== Reaction(s) not found ==
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* [[RXN1F-144]]
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* [http://metacyc.org/META/NEW-IMAGE?object=BENZOATE--COA-LIGASE-RXN BENZOATE--COA-LIGASE-RXN]
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* [[RXN-3701]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11272 RXN-11272]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2002 RXN-2002]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2003 RXN-2003]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2005 RXN-2005]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6724 RXN-6724]
 
== External links  ==
 
== External links  ==
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* DRUGBANK : DB07841
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* PLANTCYC : PWY-6443
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* PUBCHEM:
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{{#set: taxonomic range=TAX-3193}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5497105 5497105]
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{{#set: common name=benzoate biosynthesis I (CoA-dependent, β-oxidative)}}
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* HMDB : HMDB04486
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{{#set: common name=benzoic acid biosynthesis}}
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* LIGAND-CPD:
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{{#set: reaction found=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00353 C00353]
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{{#set: total reaction=9}}
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* CHEMSPIDER:
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{{#set: completion rate=22.0}}
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** [http://www.chemspider.com/Chemical-Structure.4593687.html 4593687]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58756 58756]
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* METABOLIGHTS : MTBLC58756
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]}}
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{{#set: inchi key=InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K}}
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{{#set: common name=geranylgeranyl diphosphate}}
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{{#set: molecular weight=447.424    }}
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{{#set: common name=all-trans-geranyl-geranyl-pp|geranylgeranyl-PP|GGPP|geranylgeranyl diphosphate|(2E,6E,10E)-geranylgeranyl diphosphate|ω,E,E,E-geranylgeranyl diphosphate|(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate|all-trans-geranylgeranyl diphosphate|2-trans,6-trans,10-trans-geranylgeranyl diphosphate}}
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{{#set: consumed by=RXN-7663|2.5.1.32-RXN|RXN-11486|RXN-10625}}
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{{#set: produced by=GGPS|FARNESYLTRANSTRANSFERASE-RXN}}
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{{#set: reversible reaction associated=RXN-7673|RXN-7658|RXN1F-144|RXN-3701}}
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Latest revision as of 19:43, 21 March 2018

Pathway PWY-6443

  • taxonomic range:
  • common name:
    • benzoate biosynthesis I (CoA-dependent, β-oxidative)
  • Synonym(s):
    • benzoic acid biosynthesis

Reaction(s) found

2 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

  • PLANTCYC : PWY-6443




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