Difference between revisions of "RXN-13729"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYLENETETRAHYDROMETHANOPTERIN METHYLENETETRAHYDROMETHANOPTERIN] == * smiles: ** CC4([CH]3(C(...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13729 RXN-13729] == * direction: ** LEFT-TO-RIGHT * common name: ** sphinganine1-phosphate_aldo...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYLENETETRAHYDROMETHANOPTERIN METHYLENETETRAHYDROMETHANOPTERIN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13729 RXN-13729] ==
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* smiles:
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* direction:
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** CC4([CH]3(C(C)N(C2(C=CC(CC(O)C(O)C(O)COC1(C(O)C(C(COP([O-])(=O)OC(C(=O)[O-])CCC(=O)[O-])O1)O))=CC=2))CN3C5(C(=O)NC(N)=NC(N4)=5)))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=GBMIGEWJAPFSQI-CAFBYHECSA-K
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* common name:
 
* common name:
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** 5,10-methylene-tetrahydromethanopterin
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** sphinganine1-phosphate_aldolase
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* molecular weight:
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* ec number:
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** 785.677   
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** [http://enzyme.expasy.org/EC/4.1.2.27 EC-4.1.2.27]
 
* Synonym(s):
 
* Synonym(s):
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** N5,N10-methylene-5,6,7,8-tetrahydromethanopterin
 
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** 5,10-methylene-5,6,7,8-tetrahydromethanopterin
 
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** methylene-H4MPT
 
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** 5,10-methylene-H4MPT
 
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** N5,N10-methylenetetrahydromethanopterin
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-15635]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[PHTYOSPHINGOSINE-1-P]][c] '''=>''' 1 [[CPD-14766]][c] '''+''' 1 [[PHOSPHORYL-ETHANOLAMINE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 phytosphingosine 1-phosphate[c] '''=>''' 1 2-hydroxyhexadecanal[c] '''+''' 1 O-phosphoethanolamine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_105]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
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** '''5''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46931094 46931094]
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{{#set: common name=sphinganine1-phosphate_aldolase}}
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* CHEBI:
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{{#set: ec number=EC-4.1.2.27}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57818 57818]
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{{#set: gene associated=Tiso_gene_105}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-7119}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04377 C04377]
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{{#set: reconstruction category=orthology|annotation}}
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* HMDB : HMDB60401
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: smiles=CC4([CH]3(C(C)N(C2(C=CC(CC(O)C(O)C(O)COC1(C(O)C(C(COP([O-])(=O)OC(C(=O)[O-])CCC(=O)[O-])O1)O))=CC=2))CN3C5(C(=O)NC(N)=NC(N4)=5)))}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: inchi key=InChIKey=GBMIGEWJAPFSQI-CAFBYHECSA-K}}
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{{#set: common name=5,10-methylene-tetrahydromethanopterin}}
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{{#set: molecular weight=785.677    }}
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{{#set: common name=N5,N10-methylene-5,6,7,8-tetrahydromethanopterin|5,10-methylene-5,6,7,8-tetrahydromethanopterin|methylene-H4MPT|5,10-methylene-H4MPT|N5,N10-methylenetetrahydromethanopterin}}
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{{#set: consumed by=RXN-15635}}
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Latest revision as of 20:43, 21 March 2018

Reaction RXN-13729

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • sphinganine1-phosphate_aldolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7119, sphingolipid recycling and degradation (yeast): PWY-7119
    • 5 reactions found over 11 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13729&oldid=43474"