Difference between revisions of "RXN-12789"

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(Created page with "Category:Gene == Gene Tiso_gene_11297 == * left end position: ** 4785 * transcription direction: ** NEGATIVE * right end position: ** 7171 * centisome position: ** 60.6079...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12789 RXN-12789] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-beta_hydroxysteroid_dehyd...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_11297 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12789 RXN-12789] ==
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* left end position:
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* direction:
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** 4785
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** 3-beta_hydroxysteroid_dehydrogenase_isomerase
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* right end position:
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** ORF
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** 7171
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.145 EC-1.1.1.145]
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** 60.607983   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[HISTCYCLOHYD-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[NAD]][c] '''+''' 1 [[CPD-4143]][c] '''=>''' 1 [[CPD-13793]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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***automated-name-match
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* With common name(s):
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** [[pantograph]]-[[athaliana]]
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** 1 NAD+[c] '''+''' 1 sitosterol[c] '''=>''' 1 3-oxo-24-ethyl-cholest-5-ene[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[HISTPRATPHYD-RXN]]
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* Gene: [[Tiso_gene_11016]]
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** [[pantograph]]-[[athaliana]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[synechocystis]]
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_897]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PRACH]]
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*** Assignment: EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[orthology-esiliculosus]]
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* [[PRADP]]
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* Gene: [[Tiso_gene_18774]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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== Pathways associated ==
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*** Assignment: EC-NUMBER
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* [[HISTSYN-PWY]]
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* Gene: [[Tiso_gene_2957]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6948]], sitosterol degradation to androstenedione: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6948 PWY-6948]
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** '''2''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4785}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=3-beta_hydroxysteroid_dehydrogenase_isomerase}}
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{{#set: right end position=7171}}
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{{#set: common name=ORF}}
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{{#set: centisome position=60.607983    }}
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{{#set: ec number=EC-1.1.1.145}}
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{{#set: reaction associated=HISTCYCLOHYD-RXN|HISTPRATPHYD-RXN|PRACH|PRADP}}
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{{#set: gene associated=Tiso_gene_11016|Tiso_gene_897|Tiso_gene_18774|Tiso_gene_2957}}
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{{#set: pathway associated=HISTSYN-PWY}}
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{{#set: in pathway=PWY-6948}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:43, 21 March 2018

Reaction RXN-12789

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-beta_hydroxysteroid_dehydrogenase_isomerase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 sitosterol[c] => 1 3-oxo-24-ethyl-cholest-5-ene[c] + 1 H+[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6948, sitosterol degradation to androstenedione: PWY-6948
    • 2 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12789&oldid=43490"