Difference between revisions of "Tiso gene 13317"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14278 RXN-14278] == * direction: ** REVERSIBLE * common name: ** hexanoyl-CoA dehydrogenase **...")
 
(Created page with "Category:Gene == Gene Tiso_gene_13317 == * right end position: ** 2586 * transcription direction: ** POSITIVE * left end position: ** 3 * centisome position: ** 4.70145760...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14278 RXN-14278] ==
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== Gene Tiso_gene_13317 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 2586
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* common name:
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* transcription direction:
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** hexanoyl-CoA dehydrogenase
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** POSITIVE
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** acyl-_dehydrogenase
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* left end position:
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** acyl-coenzyme_a_oxidase
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** 3
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** ORF
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* centisome position:
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** acyl-CoA_dehydrogenase
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** 4.701457600e-2
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.8.7 EC-1.3.8.7]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2PGADEHYDRAT-RXN]]
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** 1 [[HEXANOYL-COA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[CPD0-2121]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 hexanoyl-CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''<=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 trans-hex-2-enoyl-CoA[c]
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** Source: [[orthology-synechocystis]]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[PWY-1042]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[P341-PWY]]
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* [[Tiso_gene_6475]]
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* [[PWY-2221]]
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** IN-SILICO_ANNOTATION
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* [[PWY-1622]]
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***EC-NUMBER
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* [[GLUCONEO-PWY]]
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** [[pantograph]]-[[esiliculosus]]
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* [[GLYCOLYSIS]]
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* [[Tiso_gene_18566]]
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* [[NPGLUCAT-PWY]]
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** IN-SILICO_ANNOTATION
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* [[ANAGLYCOLYSIS-PWY]]
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***EC-NUMBER
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* [[PWY-7218]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-6901]]
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* [[Tiso_gene_5991]]
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* [[P124-PWY]]
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** IN-SILICO_ANNOTATION
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* [[PWY-6886]]
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***EC-NUMBER
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* [[PWY66-399]]
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* [[Tiso_gene_17967]]
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* [[PWY-5723]]
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** IN-SILICO_ANNOTATION
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* [[PWY-6142]]
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***EC-NUMBER
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* [[PWY-5484]]
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* [[Tiso_gene_883]]
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* [[PWY-7124]]
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** EXPERIMENTAL_ANNOTATION
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* [[P122-PWY]]
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***EC-NUMBER
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* [[PWY-7003]]
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* [[Tiso_gene_14511]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8272]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16631]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2586}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31208 31208]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=3}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04751 R04751]
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{{#set: centisome position=4.701457600e-2}}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=2PGADEHYDRAT-RXN}}
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{{#set: common name=hexanoyl-CoA dehydrogenase}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|PWY-1622|GLUCONEO-PWY|GLYCOLYSIS|NPGLUCAT-PWY|ANAGLYCOLYSIS-PWY|PWY-7218|PWY-6901|P124-PWY|PWY-6886|PWY66-399|PWY-5723|PWY-6142|PWY-5484|PWY-7124|P122-PWY|PWY-7003}}
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{{#set: common name=acyl-_dehydrogenase}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
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{{#set: common name=ORF}}
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{{#set: common name=acyl-CoA_dehydrogenase}}
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{{#set: ec number=EC-1.3.8.7}}
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{{#set: gene associated=Tiso_gene_6475|Tiso_gene_18566|Tiso_gene_5991|Tiso_gene_17967|Tiso_gene_883|Tiso_gene_14511|Tiso_gene_8272|Tiso_gene_16631}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:43, 21 March 2018

Gene Tiso_gene_13317

  • right end position:
    • 2586
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3
  • centisome position:
    • 4.701457600e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13317&oldid=43491"