Difference between revisions of "PWY-5526"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5901 RXN-5901] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase * ec numb...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5526 PWY-5526] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-93681 TAX-9...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5901 RXN-5901] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5526 PWY-5526] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-93681 TAX-93681]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-204457 TAX-204457]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-204455 TAX-204455]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-356 TAX-356]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-191412 TAX-191412]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1046 TAX-1046]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-204441 TAX-204441]
 
* common name:
 
* common name:
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** polyketide_synthase
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** bacteriochlorophyll a biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.36 EC-1.1.1.36]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''13''' reactions in the full pathway
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** 1 [[ACETOACETYL-COA]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-650]][c] '''+''' 1 [[NADP]][c]
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* [[RXN-5286]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 acetoacetyl-CoA[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 (3R)-3-hydroxybutanoyl-CoA[c] '''+''' 1 NADP+[c]
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*** [[Tiso_gene_13868]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[manual-primary_network]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-creinhardtii]]
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* [[Tiso_gene_6563]]
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== Reaction(s) not found ==
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17424 RXN-17424]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17425 RXN-17425]
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* [[Tiso_gene_6562]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17491 RXN-17491]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8785 RXN-8785]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8786 RXN-8786]
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* [[Tiso_gene_136]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8787 RXN-8787]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8788 RXN-8788]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8789 RXN-8789]
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* [[Tiso_gene_500]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8790 RXN-8790]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8791 RXN-8791]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8792 RXN-8792]
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* [[Tiso_gene_13394]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8793 RXN-8793]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5424]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5425]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5741]], ethylmalonyl-CoA pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5741 PWY-5741]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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* [[PWY1-3]], polyhydroxybutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1-3 PWY1-3]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7216]], (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7216 PWY-7216]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5676]], acetyl-CoA fermentation to butanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5676 PWY-5676]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-93681}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01977 R01977]
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{{#set: taxonomic range=TAX-204457}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-204455}}
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{{#set: common name=polyketide_synthase}}
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{{#set: taxonomic range=TAX-356}}
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{{#set: ec number=EC-1.1.1.36}}
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{{#set: taxonomic range=TAX-191412}}
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{{#set: gene associated=Tiso_gene_6563|Tiso_gene_6562|Tiso_gene_136|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_5424|Tiso_gene_135|Tiso_gene_5425|Tiso_gene_10876}}
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{{#set: taxonomic range=TAX-1046}}
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{{#set: in pathway=PWY-5741|PWY1-3|PWY-7216|PWY-5676}}
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{{#set: taxonomic range=TAX-204441}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=bacteriochlorophyll a biosynthesis}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reaction found=1}}
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: total reaction=13}}
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{{#set: completion rate=8.0}}

Latest revision as of 19:44, 21 March 2018

Pathway PWY-5526

Reaction(s) found

1 reactions found over 13 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5526&oldid=43547"