Difference between revisions of "RXN-14386"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_15846 == * left end position: ** 179 * transcription direction: ** POSITIVE * right end position: ** 2635 * centisome position: ** 3.759714...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14386 RXN-14386] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_mitochondrial ** c...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14386 RXN-14386] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** cysteine_mitochondrial |
| − | + | ** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf | |
| − | ** | + | * ec number: |
| − | * | + | ** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7] |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** in-silico_annotation | + | ** 1 [[S-CD-S-SP-Complex]][c] '''=>''' 1 [[CD-2S-SP-Complex]][c] |
| − | *** | + | * With common name(s): |
| − | ** experimental_annotation | + | ** 1 an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] '''=>''' 1 a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex[c] |
| − | *** | + | |
| − | ** [[ | + | == Genes associated with this reaction == |
| − | ** [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | ** [[ | + | * Gene: [[Tiso_gene_11478]] |
| − | * | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| − | ** [[ | + | ** Source: [[annotation-experimental_annotation]] |
| − | == Pathways | + | *** Assignment: EC-NUMBER |
| − | * [[PWY- | + | ** Source: [[orthology-esiliculosus]] |
| − | + | * Gene: [[Tiso_gene_14710]] | |
| − | + | ** Source: [[annotation-experimental_annotation]] | |
| − | + | *** Assignment: EC-NUMBER | |
| − | * [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | * [[ | + | * Gene: [[Tiso_gene_4284]] |
| − | * [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| − | * [[ | + | ** Source: [[annotation-experimental_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| − | * [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | * [[ | + | == Pathways == |
| + | * [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250] | ||
| + | ** '''10''' reactions found over '''10''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=cysteine_mitochondrial}} |
| − | {{#set: | + | {{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}} |
| − | {{#set: | + | {{#set: ec number=EC-2.8.1.7}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_11478|Tiso_gene_14710|Tiso_gene_4284}} |
| − | {{#set: pathway | + | {{#set: in pathway=PWY-7250}} |
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:44, 21 March 2018
Contents
Reaction RXN-14386
- direction:
- LEFT-TO-RIGHT
- common name:
- cysteine_mitochondrial
- cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 S-CD-S-SP-Complex[c] => 1 CD-2S-SP-Complex[c]
- With common name(s):
- 1 an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] => 1 a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_11478
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14710
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-experimental_annotation
- Gene: Tiso_gene_4284
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
- PWY-7250, [2Fe-2S] iron-sulfur cluster biosynthesis: PWY-7250
- 10 reactions found over 10 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
