Difference between revisions of "RXN-14386"

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(Created page with "Category:Gene == Gene Tiso_gene_12995 == * right end position: ** 4203 * transcription direction: ** POSITIVE * left end position: ** 1835 * centisome position: ** 15.8545...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14386 RXN-14386] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_mitochondrial ** c...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_12995 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14386 RXN-14386] ==
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* right end position:
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* direction:
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** 4203
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** cysteine_mitochondrial
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* left end position:
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** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
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** 1835
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
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** 15.854502   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[PURINE-NUCLEOSIDASE-RXN]]
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* With identifiers:
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** Source: [[annotation-in-silico_annotation]]
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** 1 [[S-CD-S-SP-Complex]][c] '''=>''' 1 [[CD-2S-SP-Complex]][c]
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*** Assignment: ec-number
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* With common name(s):
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* Reaction: [[RXN-14065]]
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** 1 an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] '''=>''' 1 a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_11478]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** Assignment: EC-NUMBER
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* Reaction: [[RXN0-363]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14710]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_4284]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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* Reaction: [[RXN0-366]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-6596]]
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*** Tool: [[pathwaytools]]
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* [[PWY-7570]]
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* [[PWY-6607]]
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* [[PWY-6606]]
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* [[PWY-6599]]
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* [[PWY-7569]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=4203}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=cysteine_mitochondrial}}
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{{#set: left end position=1835}}
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{{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}}
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{{#set: centisome position=15.854502    }}
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{{#set: ec number=EC-2.8.1.7}}
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{{#set: reaction associated=PURINE-NUCLEOSIDASE-RXN|RXN-14065|RXN0-363|RXN0-366}}
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{{#set: gene associated=Tiso_gene_11478|Tiso_gene_14710|Tiso_gene_4284}}
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{{#set: pathway associated=PWY-6596|PWY-7570|PWY-6607|PWY-6606|PWY-6599|PWY-7569}}
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{{#set: in pathway=PWY-7250}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:44, 21 March 2018

Reaction RXN-14386

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cysteine_mitochondrial
    • cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] => 1 a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7250, [2Fe-2S] iron-sulfur cluster biosynthesis: PWY-7250
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14386&oldid=43553"