Difference between revisions of "PRAISOM-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-299 RXN0-299] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha-ketoglutarate-dependent...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-299 RXN0-299] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** alpha-ketoglutarate-dependent_taurine_dioxygenase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.11.17 EC-1.14.11.17]
+
** [http://enzyme.expasy.org/EC/5.3.1.24 EC-5.3.1.24]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[TAURINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SO3]][c] '''+''' 1 [[CPD-1772]][c]
+
** 1 [[N-5-PHOSPHORIBOSYL-ANTHRANILATE]][c] '''=>''' 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 taurine[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 succinate[c] '''+''' 1 H+[c] '''+''' 1 CO2[c] '''+''' 1 sulfite[c] '''+''' 1 2-aminoacetaldehyde[c]
+
** 1 N-(5-phosphoribosyl)-anthranilate[c] '''=>''' 1 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17672]]
+
* Gene: [[Tiso_gene_10297]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_10298]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-981]], taurine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-981 PWY0-981]
+
* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15909 15909]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21540 21540]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05320 R05320]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03509 R03509]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P16923 P16923]
 +
** [http://www.uniprot.org/uniprot/O67853 O67853]
 +
** [http://www.uniprot.org/uniprot/P12289 P12289]
 +
** [http://www.uniprot.org/uniprot/P42393 P42393]
 +
** [http://www.uniprot.org/uniprot/Q9PIF3 Q9PIF3]
 +
** [http://www.uniprot.org/uniprot/Q57893 Q57893]
 +
** [http://www.uniprot.org/uniprot/P20167 P20167]
 +
** [http://www.uniprot.org/uniprot/Q9JVD1 Q9JVD1]
 +
** [http://www.uniprot.org/uniprot/P00910 P00910]
 +
** [http://www.uniprot.org/uniprot/P00909 P00909]
 +
** [http://www.uniprot.org/uniprot/P00912 P00912]
 +
** [http://www.uniprot.org/uniprot/P13997 P13997]
 +
** [http://www.uniprot.org/uniprot/P50857 P50857]
 +
** [http://www.uniprot.org/uniprot/P27710 P27710]
 +
** [http://www.uniprot.org/uniprot/P17218 P17218]
 +
** [http://www.uniprot.org/uniprot/P00908 P00908]
 +
** [http://www.uniprot.org/uniprot/P18483 P18483]
 +
** [http://www.uniprot.org/uniprot/Q02002 Q02002]
 +
** [http://www.uniprot.org/uniprot/Q56320 Q56320]
 +
** [http://www.uniprot.org/uniprot/Q01128 Q01128]
 +
** [http://www.uniprot.org/uniprot/P74435 P74435]
 +
** [http://www.uniprot.org/uniprot/Q9YGB1 Q9YGB1]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=alpha-ketoglutarate-dependent_taurine_dioxygenase}}
+
{{#set: ec number=EC-5.3.1.24}}
−
{{#set: ec number=EC-1.14.11.17}}
+
{{#set: gene associated=Tiso_gene_10297|Tiso_gene_10298}}
−
{{#set: gene associated=Tiso_gene_17672}}
+
{{#set: in pathway=TRPSYN-PWY}}
−
{{#set: in pathway=PWY0-981}}
+
{{#set: reconstruction category=orthology|manual}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=manual-primary_network|orthology-creinhardtii|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:45, 21 March 2018

Reaction PRAISOM-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PRAISOM-RXN&oldid=43602"