Difference between revisions of "Tiso gene 6007"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16483 RXN-16483] == * direction: ** LEFT-TO-RIGHT * common name: ** iduronate-2-sulfatase * ec...")
(Created page with "Category:Gene == Gene Tiso_gene_6007 == * right end position: ** 17819 * transcription direction: ** POSITIVE * left end position: ** 15211 * centisome position: ** 81.368...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16483 RXN-16483] ==
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== Gene Tiso_gene_6007 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 17819
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* common name:
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* transcription direction:
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** iduronate-2-sulfatase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.1.6.13 EC-3.1.6.13]
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** 15211
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* centisome position:
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** 81.36835   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.2.1.21-RXN]]
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** 1 [[CPD-17701]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SULFATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-17714]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 4-deoxy-2-O-sulfo-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate[c] '''+''' 1 H2O[c] '''=>''' 1 sulfate[c] '''+''' 1 H+[c] '''+''' 1 4-deoxy-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-10769]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_18595]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-10773]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13602]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13603]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14179]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-5341]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-8036]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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== Pathways  ==
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-7644]], heparin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7644 PWY-7644]
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*** Assignment: ec-number
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* Reaction: [[RXN-9674]]
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-3121]]
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* [[PWY-6002]]
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* [[PWY-6788]]
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* [[PWY-5176]]
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* [[PWY-7092]]
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* [[PWY-7091]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=17819}}
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{{#set: common name=iduronate-2-sulfatase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-3.1.6.13}}
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{{#set: left end position=15211}}
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{{#set: gene associated=Tiso_gene_18595}}
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{{#set: centisome position=81.36835    }}
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{{#set: in pathway=PWY-7644}}
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{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:46, 21 March 2018

Gene Tiso_gene_6007

  • right end position:
    • 17819
  • transcription direction:
    • POSITIVE
  • left end position:
    • 15211
  • centisome position:
    • 81.36835
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6007&oldid=43624"