Difference between revisions of "Tiso gene 11001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.142-RXN 2.4.1.142-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** chitobiosyldiphosph...")
(Created page with "Category:Gene == Gene Tiso_gene_11001 == * right end position: ** 2291 * transcription direction: ** POSITIVE * left end position: ** 47 * centisome position: ** 0.5778925...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.142-RXN 2.4.1.142-RXN] ==
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== Gene Tiso_gene_11001 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2291
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* common name:
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* transcription direction:
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** chitobiosyldiphosphodolichol_beta-
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.4.1.142 EC-2.4.1.142]
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** 47
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* centisome position:
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** 0.57789254   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN]]
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** 1 [[NN-DIACETYLCHITOBIOSYLDIPHOSPHODOLICHO]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[ALPHA-D-MANNOSYLCHITOBIO]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 N-acetyl-β-D-glucosaminyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphosphodolichol[c] '''+''' 1 GDP-α-D-mannose[c] '''=>''' 1 GDP[c] '''+''' 1 β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 H+[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_8387]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=2291}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04502 R04502]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=47}}
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{{#set: common name=chitobiosyldiphosphodolichol_beta-}}
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{{#set: centisome position=0.57789254    }}
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{{#set: ec number=EC-2.4.1.142}}
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{{#set: reaction associated=HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN}}
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{{#set: gene associated=Tiso_gene_8387}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:46, 21 March 2018

Gene Tiso_gene_11001

  • right end position:
    • 2291
  • transcription direction:
    • POSITIVE
  • left end position:
    • 47
  • centisome position:
    • 0.57789254
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11001&oldid=43661"