Difference between revisions of "RXN-773"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11842 RXN-11842] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridine_synthase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-773 RXN-773] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11842 RXN-11842] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-773 RXN-773] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** trna_pseudouridine_synthase
 
−
** trna_pseudouridinesynthase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.4.99.28 EC-5.4.99.28]
+
** [http://enzyme.expasy.org/EC/1.14.13 EC-1.14.13]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Uridine32-in-tRNA]][c] '''=>''' 1 [[tRNA-pseudouridine32]][c]
+
** 1 [[CPD-710]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-712]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a uridine32 in tRNA[c] '''=>''' 1 a pseudouridine32 in tRNA[c]
+
** 1 campestanol[c] '''+''' 1 H+[c] '''+''' 1 oxygen[c] '''+''' 1 NADPH[c] '''=>''' 1 H2O[c] '''+''' 1 6-deoxocathasterone[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_4020]]
+
* Gene: [[Tiso_gene_3577]]
−
** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_8263]]
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* [[Tiso_gene_4021]]
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** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_9833]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_11913]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_18959]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_19622]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_2988]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-699]], brassinosteroid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-699 PWY-699]
 +
** '''11''' reactions found over '''25''' reactions in the full pathway
 +
* [[PWY-2582]], brassinosteroid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2582 PWY-2582]
 +
** '''7''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07454 R07454]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=trna_pseudouridine_synthase}}
+
{{#set: ec number=EC-1.14.13}}
−
{{#set: common name=trna_pseudouridinesynthase}}
+
{{#set: gene associated=Tiso_gene_3577|Tiso_gene_8263}}
−
{{#set: ec number=EC-5.4.99.28}}
+
{{#set: in pathway=PWY-699|PWY-2582}}
−
{{#set: gene associated=Tiso_gene_4020|Tiso_gene_4021|Tiso_gene_9833|Tiso_gene_11913|Tiso_gene_18959|Tiso_gene_19622|Tiso_gene_2988}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 19:46, 21 March 2018

Reaction RXN-773

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 campestanol[c] + 1 H+[c] + 1 oxygen[c] + 1 NADPH[c] => 1 H2O[c] + 1 6-deoxocathasterone[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-699, brassinosteroid biosynthesis I: PWY-699
    • 11 reactions found over 25 reactions in the full pathway
  • PWY-2582, brassinosteroid biosynthesis II: PWY-2582
    • 7 reactions found over 21 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-773&oldid=43698"