Difference between revisions of "PWY-6318"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10821 RXN-10821] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10821 RXN-10821] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/2.3.1.192 EC-2.3.1.192]
+
** L-phenylalanine degradation IV (mammalian, via side chain)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''4''' reactions found over '''9''' reactions in the full pathway
−
** 1 [[CPD-207]][c] '''+''' 1 [[GLY]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-11715]][c] '''+''' 1 [[CO-A]][c]
+
* [[PHENDEHYD-RXN]]
−
* With common name(s):
+
** 0 associated gene:
−
** 1 phenylacetyl-CoA[c] '''+''' 1 glycine[c] '''=>''' 1 H+[c] '''+''' 1 phenylacetylglycine[c] '''+''' 1 coenzyme A[c]
+
** 1 reconstruction source(s) associated:
−
 
+
*** [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
* [[RXN-10814]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 6 associated gene(s):
−
* [[Tiso_gene_7195]]
+
*** [[Tiso_gene_12889]]
−
** [[pantograph]]-[[athaliana]]
+
*** [[Tiso_gene_15680]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_13538]]
−
== Pathways  ==
+
*** [[Tiso_gene_17809]]
−
* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318]
+
*** [[Tiso_gene_6815]]
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
*** [[Tiso_gene_17718]]
−
== Reconstruction information  ==
+
** 4 reconstruction source(s) associated:
−
* [[orthology]]:
+
*** [[annotation-experimental_annotation]]
−
** [[pantograph]]:
+
*** [[manual-primary_network]]
−
*** [[esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
−
*** [[athaliana]]
+
*** [[orthology-esiliculosus]]
 +
* [[RXN-10815]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_18328]]
 +
*** [[Tiso_gene_18976]]
 +
*** [[Tiso_gene_18977]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10821]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_7195]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINE-N-PHENYLACETYLTRANSFERASE-RXN GLUTAMINE-N-PHENYLACETYLTRANSFERASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE-DECARBOXYLASE-RXN PHENYLALANINE-DECARBOXYLASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10816 RXN-10816]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10817 RXN-10817]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10819 RXN-10819]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* LIGAND-MAP:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27850 27850]
+
** [http://www.genome.jp/dbget-bin/www_bget?map00360 map00360]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-33208}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05841 R05841]
+
{{#set: common name=L-phenylalanine degradation IV (mammalian, via side chain)}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction found=4}}
−
{{#set: ec number=EC-2.3.1.192}}
+
{{#set: total reaction=9}}
−
{{#set: gene associated=Tiso_gene_7195}}
+
{{#set: completion rate=44.0}}
−
{{#set: in pathway=PWY-6318}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus|athaliana}}
+

Latest revision as of 20:46, 21 March 2018

Pathway PWY-6318

  • taxonomic range:
  • common name:
    • L-phenylalanine degradation IV (mammalian, via side chain)
  • Synonym(s):

Reaction(s) found

4 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6318&oldid=43699"