Difference between revisions of "PWY-5870"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4021 RXN-4021] == * direction: ** LEFT-TO-RIGHT * common name: ** sterol_methyltransferase * ec...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4890 TAX-48...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4021 RXN-4021] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4890 TAX-4890]
 
* common name:
 
* common name:
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** sterol_methyltransferase
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** ubiquinol-8 biosynthesis (eukaryotic)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.41 EC-2.1.1.41]
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* Synonym(s):
 
* Synonym(s):
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** ubiquinone-8 biosynthesis (eukaryotic)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''9''' reactions in the full pathway
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CYCLOARTENOL]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-696]][c]
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* [[2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 cycloartenol[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 24-methylenecycloartanol[c]
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*** [[Tiso_gene_19352]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[4OHBENZOATE-OCTAPRENYLTRANSFER-RXN]]
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* [[Tiso_gene_11849]]
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** 1 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_4719]]
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***AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_11850]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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* [[DHHB-METHYLTRANSFER-RXN]]
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***AUTOMATED-NAME-MATCH
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** 1 associated gene(s):
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_6943]]
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* [[Tiso_gene_12590]]
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[creinhardtii]]
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*** [[annotation-in-silico_annotation]]
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== Pathways  ==
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== Reaction(s) not found ==
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* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN 2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN]
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** '''10''' reactions found over '''36''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=CHORPYRLY-RXN CHORPYRLY-RXN]
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* [[PWY-7155]], 7-dehydroporiferasterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7155 PWY-7155]
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* [http://metacyc.org/META/NEW-IMAGE?object=OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9277 RXN-9277]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9280 RXN-9280]
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* Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9283 RXN-9283]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4890}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07481 R07481]
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{{#set: common name=ubiquinol-8 biosynthesis (eukaryotic)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ubiquinone-8 biosynthesis (eukaryotic)}}
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{{#set: common name=sterol_methyltransferase}}
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{{#set: reaction found=3}}
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{{#set: ec number=EC-2.1.1.41}}
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{{#set: total reaction=9}}
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{{#set: gene associated=Tiso_gene_11849|Tiso_gene_11850|Tiso_gene_12590}}
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{{#set: completion rate=33.0}}
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{{#set: in pathway=PWY-2541|PWY-7155}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:46, 21 March 2018

Pathway PWY-5870

  • taxonomic range:
  • common name:
    • ubiquinol-8 biosynthesis (eukaryotic)
  • Synonym(s):
    • ubiquinone-8 biosynthesis (eukaryotic)

Reaction(s) found

3 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5870&oldid=43709"