Difference between revisions of "RXN-4021"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5268 PWY-5268] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4021 RXN-4021] == * direction: ** LEFT-TO-RIGHT * common name: ** sterol_methyltransferase * ec...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4021 RXN-4021] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** sterol_methyltransferase |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.1.1.41 EC-2.1.1.41] | ||
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction | + | == Reaction Formula == |
| − | + | * With identifiers: | |
| − | + | ** 1 [[CYCLOARTENOL]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-696]][c] '''+''' 1 [[PROTON]][c] | |
| − | * | + | * With common name(s): |
| − | *** [[ | + | ** 1 cycloartenol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 24-methylenecycloartanol[c] '''+''' 1 H+[c] |
| − | ** | + | |
| − | *** [[orthology-athaliana]] | + | == Genes associated with this reaction == |
| − | == | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [http://metacyc.org/META/NEW-IMAGE?object= | + | * Gene: [[Tiso_gene_11849]] |
| − | * [http://metacyc.org/META/NEW-IMAGE?object= | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [ | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [ | + | * Gene: [[Tiso_gene_11850]] |
| − | * [ | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | * Gene: [[Tiso_gene_12590]] | ||
| + | ** Source: [[orthology-creinhardtii]] | ||
| + | == Pathways == | ||
| + | * [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541] | ||
| + | ** '''10''' reactions found over '''36''' reactions in the full pathway | ||
| + | * [[PWY-7155]], 7-dehydroporiferasterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7155 PWY-7155] | ||
| + | ** '''3''' reactions found over '''10''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-creinhardtii]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: common name= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07481 R07481] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=sterol_methyltransferase}} |
| − | {{#set: | + | {{#set: ec number=EC-2.1.1.41}} |
| + | {{#set: gene associated=Tiso_gene_11849|Tiso_gene_11850|Tiso_gene_12590}} | ||
| + | {{#set: in pathway=PWY-2541|PWY-7155}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|orthology-creinhardtii}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:47, 21 March 2018
Contents
Reaction RXN-4021
- direction:
- LEFT-TO-RIGHT
- common name:
- sterol_methyltransferase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CYCLOARTENOL[c] + 1 S-ADENOSYLMETHIONINE[c] => 1 ADENOSYL-HOMO-CYS[c] + 1 CPD-696[c] + 1 PROTON[c]
- With common name(s):
- 1 cycloartenol[c] + 1 S-adenosyl-L-methionine[c] => 1 S-adenosyl-L-homocysteine[c] + 1 24-methylenecycloartanol[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_11849
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_11850
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-athaliana
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_12590
- Source: orthology-creinhardtii
Pathways
- PWY-2541, plant sterol biosynthesis: PWY-2541
- 10 reactions found over 36 reactions in the full pathway
- PWY-7155, 7-dehydroporiferasterol biosynthesis: PWY-7155
- 3 reactions found over 10 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- LIGAND-RXN:
