Difference between revisions of "Tiso gene 5529"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-165 RXN1F-165] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_5529 == * right end position: ** 12620 * transcription direction: ** POSITIVE * left end position: ** 12112 * centisome position: ** 91.006...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-165 RXN1F-165] ==
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== Gene Tiso_gene_5529 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 12620
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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** POSITIVE
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* left end position:
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** 12112
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* centisome position:
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** 91.00609   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADENOSINETRIPHOSPHATASE-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-134]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CPD1F-137]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[ATPASE-RXN]]
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** 1 oxygen[c] '''+''' 1 gibberellin A9[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 succinate[c] '''+''' 1 gibberellin A4[c] '''+''' 1 CO2[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-esiliculosus]]
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* [[Tiso_gene_3330]]
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* Reaction: [[RXN-12195]]
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** [[pantograph]]-[[athaliana]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[RXN-12196]]
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== Pathways  ==
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** Source: [[orthology-esiliculosus]]
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* [[PWY-5070]], gibberellin biosynthesis I (non C-3, non C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070]
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* Reaction: [[RXN0-5462]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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** Source: [[orthology-esiliculosus]]
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== Reconstruction information  ==
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== Pathways associated ==
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* [[orthology]]:
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* [[PWY-7184]]
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** [[pantograph]]:
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* [[PWY-7198]]
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*** [[athaliana]]
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* [[PWY-6545]]
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*** [[esiliculosus]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=12620}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06336 R06336]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=12112}}
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{{#set: ec number=EC-1.14.11}}
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{{#set: centisome position=91.00609    }}
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{{#set: gene associated=Tiso_gene_3330}}
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{{#set: reaction associated=ADENOSINETRIPHOSPHATASE-RXN|ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: in pathway=PWY-5070}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Latest revision as of 20:47, 21 March 2018

Gene Tiso_gene_5529

  • right end position:
    • 12620
  • transcription direction:
    • POSITIVE
  • left end position:
    • 12112
  • centisome position:
    • 91.00609
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5529&oldid=43724"