Difference between revisions of "RXN-10642"

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(Created page with "Category:Gene == Gene Tiso_gene_4032 == * left end position: ** 12518 * transcription direction: ** NEGATIVE * right end position: ** 15520 * centisome position: ** 80.444...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] == * direction: ** REVERSIBLE * common name: ** uroporphyrinogen_chloroplast *...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4032 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] ==
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* left end position:
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* direction:
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** 12518
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** REVERSIBLE
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* transcription direction:
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* common name:
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** NEGATIVE
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** uroporphyrinogen_chloroplast
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* right end position:
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** uroporphyrinogen_decarboxylase
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** 15520
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/4.1.1.37 EC-4.1.1.37]
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** 80.4447   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[NITRILE-HYDRATASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-11444]][c] '''+''' 4 [[PROTON]][c] '''<=>''' 4 [[CARBON-DIOXIDE]][c] '''+''' 1 [[COPROPORPHYRINOGEN_I]][c]
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***ec-number
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* With common name(s):
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* [[R310-RXN]]
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** 1 uroporphyrinogen-I[c] '''+''' 4 H+[c] '''<=>''' 4 CO2[c] '''+''' 1 coproporphyrinogen I[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[R313-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* Gene: [[Tiso_gene_5173]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-14725]]
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*** Assignment: EC-NUMBER
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** in-silico_annotation
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** Source: [[annotation-experimental_annotation]]
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***ec-number
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*** Assignment: EC-NUMBER
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* [[RXN-14726]]
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** Source: [[orthology-esiliculosus]]
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** in-silico_annotation
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** Source: [[orthology-creinhardtii]]
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***ec-number
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* Gene: [[Tiso_gene_18744]]
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* [[RXN-17609]]
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** Source: [[annotation-in-silico_annotation]]
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** in-silico_annotation
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*** Assignment: EC-NUMBER
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***ec-number
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** Source: [[orthology-esiliculosus]]
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* [[RXN-7567]]
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* Gene: [[Tiso_gene_18743]]
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** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
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***ec-number
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*** Assignment: EC-NUMBER
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== Pathways associated ==
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-581]]
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*** Assignment: EC-NUMBER
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* [[PWY-5025]]
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** Source: [[orthology-esiliculosus]]
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* [[P345-PWY]]
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* Gene: [[Tiso_gene_19684]]
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* [[PWY-7308]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=12518}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31239 31239]
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{{#set: right end position=15520}}
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* LIGAND-RXN:
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{{#set: centisome position=80.4447    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R04972 R04972]
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{{#set: reaction associated=NITRILE-HYDRATASE-RXN|R310-RXN|R313-RXN|RXN-14725|RXN-14726|RXN-17609|RXN-7567}}
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{{#set: direction=REVERSIBLE}}
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{{#set: pathway associated=PWY-581|PWY-5025|P345-PWY|PWY-7308}}
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{{#set: common name=uroporphyrinogen_chloroplast}}
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{{#set: common name=uroporphyrinogen_decarboxylase}}
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{{#set: ec number=EC-4.1.1.37}}
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{{#set: gene associated=Tiso_gene_5173|Tiso_gene_18744|Tiso_gene_18743|Tiso_gene_19684}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:47, 21 March 2018

Reaction RXN-10642

  • direction:
    • REVERSIBLE
  • common name:
    • uroporphyrinogen_chloroplast
    • uroporphyrinogen_decarboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10642&oldid=43725"