Difference between revisions of "PWYQT-4450"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.165-RXN 2.3.1.165-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3699 TA...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.165-RXN 2.3.1.165-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3699 TAX-3699]
 
* common name:
 
* common name:
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** polyketide_synthase
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** aliphatic glucosinolate biosynthesis, side chain elongation cycle
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.165 EC-2.3.1.165]
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* Synonym(s):
 
* Synonym(s):
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** methionine elongation
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''10''' reactions found over '''30''' reactions in the full pathway
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** 3 [[MALONYL-COA]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 3 [[PROTON]][c] '''=>''' 1 [[WATER]][c] '''+''' 3 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADP]][c] '''+''' 4 [[CO-A]][c] '''+''' 1 [[CPD-637]][c]
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* [[RXN-18200]]
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* With common name(s):
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** 1 associated gene(s):
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** 3 malonyl-CoA[c] '''+''' 1 NADPH[c] '''+''' 1 acetyl-CoA[c] '''+''' 3 H+[c] '''=>''' 1 H2O[c] '''+''' 3 CO2[c] '''+''' 1 NADP+[c] '''+''' 4 coenzyme A[c] '''+''' 1 6-methylsalicylate[c]
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*** [[Tiso_gene_2920]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-18201]]
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* [[Tiso_gene_500]]
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** 0 associated gene:
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** IN-SILICO_ANNOTATION
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_136]]
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* [[RXN-18202]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_2920]]
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* [[Tiso_gene_13394]]
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** 1 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-experimental_annotation]]
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***EC-NUMBER
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* [[RXN-18203]]
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* [[Tiso_gene_135]]
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** 0 associated gene:
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** IN-SILICO_ANNOTATION
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_10876]]
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* [[RXN-18204]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_2920]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[PWY-7490]], patulin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7490 PWY-7490]
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*** [[annotation-experimental_annotation]]
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** '''1''' reactions found over '''15''' reactions in the full pathway
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* [[RXN-18205]]
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== Reconstruction information  ==
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** 0 associated gene:
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* Category: [[annotation]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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* [[RXN-18206]]
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** 1 associated gene(s):
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*** [[Tiso_gene_2920]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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* [[RXN-18207]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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* [[RXN-18208]]
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** 1 associated gene(s):
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*** [[Tiso_gene_2920]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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* [[RXN-18209]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18184 RXN-18184]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18185 RXN-18185]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18186 RXN-18186]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18187 RXN-18187]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18188 RXN-18188]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18189 RXN-18189]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18190 RXN-18190]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18191 RXN-18191]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18192 RXN-18192]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18193 RXN-18193]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4163 RXNQT-4163]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4166 RXNQT-4166]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4169 RXNQT-4169]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4172 RXNQT-4172]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4175 RXNQT-4175]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4345 RXNQT-4345]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4346 RXNQT-4346]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4347 RXNQT-4347]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4348 RXNQT-4348]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4349 RXNQT-4349]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* PLANTCYC : PWYQT-4450
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12240 12240]
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{{#set: taxonomic range=TAX-3699}}
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* LIGAND-RXN:
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{{#set: common name=aliphatic glucosinolate biosynthesis, side chain elongation cycle}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07253 R07253]
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{{#set: common name=methionine elongation}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=10}}
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{{#set: common name=polyketide_synthase}}
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{{#set: total reaction=30}}
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{{#set: ec number=EC-2.3.1.165}}
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{{#set: completion rate=33.0}}
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{{#set: gene associated=Tiso_gene_500|Tiso_gene_136|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_10876}}
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{{#set: in pathway=PWY-7490}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:47, 21 March 2018

Pathway PWYQT-4450

  • taxonomic range:
  • common name:
    • aliphatic glucosinolate biosynthesis, side chain elongation cycle
  • Synonym(s):
    • methionine elongation

Reaction(s) found

10 reactions found over 30 reactions in the full pathway

Reaction(s) not found

External links

  • PLANTCYC : PWYQT-4450




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