Difference between revisions of "RXN-13298"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5177 PWY-5177] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13298 RXN-13298] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5177 PWY-5177] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13298 RXN-13298] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** glutaryl-CoA degradation
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** chloroplast_beta-keto_acyl_reductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[CPD-14271]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-14275]][c] '''+''' 1 [[NADP]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_16181]]
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** 1 NADPH[c] '''+''' 1 3-oxoicosanoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 (3R)-3-hydroxy-arachidoyl-CoA[c] '''+''' 1 NADP+[c]
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*** [[Tiso_gene_15327]]
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*** [[Tiso_gene_17451]]
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== Genes associated with this reaction  ==
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** 4 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* Gene: [[Tiso_gene_9871]]
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*** [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** Assignment: EC-NUMBER
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-experimental_annotation]]
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* [[RXN-11662]]
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*** Assignment: EC-NUMBER
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** 7 associated gene(s):
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== Pathways  ==
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*** [[Tiso_gene_5857]]
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* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
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*** [[Tiso_gene_16703]]
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** '''16''' reactions found over '''16''' reactions in the full pathway
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*** [[Tiso_gene_14027]]
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== Reconstruction information  ==
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*** [[Tiso_gene_14262]]
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* Category: [[annotation]]
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*** [[Tiso_gene_14026]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_18838]]
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_18839]]
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** Source: [[annotation-in-silico_annotation]]
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** 5 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[RXN-11667]]
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** 1 associated gene(s):
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*** [[Tiso_gene_5857]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUTACONYL-COA-DECARBOXYLASE-RXN GLUTACONYL-COA-DECARBOXYLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUTARYL-COA-DEHYDROG-RXN GLUTARYL-COA-DEHYDROG-RXN]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33208}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-1.1.1.330}}
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{{#set: common name=glutaryl-CoA degradation}}
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{{#set: gene associated=Tiso_gene_9871}}
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{{#set: reaction found=3}}
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{{#set: in pathway=PWY-7036}}
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{{#set: total reaction=5}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=60.0}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:47, 21 March 2018

Reaction RXN-13298

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 3-oxoicosanoyl-CoA[c] + 1 H+[c] => 1 (3R)-3-hydroxy-arachidoyl-CoA[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7036, very long chain fatty acid biosynthesis II: PWY-7036
    • 16 reactions found over 16 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13298&oldid=43787"