Difference between revisions of "1.1.1.211-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.211-RXN 1.1.1.211-RXN] == * direction: ** REVERSIBLE * common name: ** Long chain 3-hydroxyac...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.211-RXN 1.1.1.211-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** REVERSIBLE
 
* common name:
 
* common name:
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** superpathway of glyoxylate cycle and fatty acid degradation
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** Long chain 3-hydroxyacyl-CoA dehydrogenase (Peroxisomal)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.211 EC-1.1.1.211]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
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* [[FUMHYDR-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[Long-Chain-3S-Hydroxyacyl-CoAs]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Long-Chain-oxoacyl-CoAs]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_6720]]
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** 1 NAD+[c] '''+''' 1 a long-chain (3S)-3-hydroxyacyl-CoA[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 a long-chain 3-oxoacyl-CoA[c]
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*** [[Tiso_gene_3691]]
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** 6 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14262]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[manual-primary_network]]
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== Pathways  ==
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*** [[orthology-creinhardtii]]
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== Reconstruction information  ==
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* [[GLYOXYLATE-BYPASS]]
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* Category: [[annotation]]
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** 0 associated gene:
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** Source: [[annotation-experimental_annotation]]
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* [[MALATE-DEH-RXN]]
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*** Tool: [[pathwaytools]]
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** 2 associated gene(s):
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*** [[Tiso_gene_1990]]
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*** [[Tiso_gene_2323]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PEPCARBOXYKIN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_19475]]
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** 5 reconstruction source(s) associated:
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−
*** [[annotation-experimental_annotation]]
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−
*** [[orthology-athaliana]]
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−
*** [[orthology-creinhardtii]]
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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* [[PWY-5136]]
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** 0 associated gene:
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
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== External links  ==
 
== External links  ==
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* METACYC:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=PWY-561 PWY-561]
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** [http://www.genome.jp/dbget-bin/www_bget?R01778 R01778]
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{{#set: taxonomic range=TAX-33090}}
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* UNIPROT:
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{{#set: common name=superpathway of glyoxylate cycle and fatty acid degradation}}
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** [http://www.uniprot.org/uniprot/Q64428 Q64428]
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{{#set: reaction found=5}}
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** [http://www.uniprot.org/uniprot/P40939 P40939]
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{{#set: total reaction=8}}
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{{#set: direction=REVERSIBLE}}
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{{#set: completion rate=63.0}}
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{{#set: common name=Long chain 3-hydroxyacyl-CoA dehydrogenase (Peroxisomal)}}
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{{#set: ec number=EC-1.1.1.211}}
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{{#set: gene associated=Tiso_gene_14262}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:47, 21 March 2018

Reaction 1.1.1.211-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Long chain 3-hydroxyacyl-CoA dehydrogenase (Peroxisomal)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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