Difference between revisions of "PWY-6498"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLURS-RXN GLURS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** glutamyl-trna_synthe...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6498 PWY-6498] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLURS-RXN GLURS-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6498 PWY-6498] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** ORF
+
** eumelanin biosynthesis
−
** glutamyl-trna_synthetase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/6.1.1.17 EC-6.1.1.17]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** melanochrome biosynthesis
 +
** melanogenesis
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''1''' reactions found over '''6''' reactions in the full pathway
−
** 1 [[GLT]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLT-tRNAs]][c] '''=>''' 1 [[Charged-GLT-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
* [[RXN-11403]]
−
* With common name(s):
+
** 0 associated gene:
−
** 1 L-glutamate[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAglu[c] '''=>''' 1 an L-glutamyl-[tRNAGlu][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
+
** 1 reconstruction source(s) associated:
−
 
+
*** [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
== Reaction(s) not found ==
−
Genes have been associated with this reaction based on different elements listed below.
+
* [http://metacyc.org/META/NEW-IMAGE?object=DOPACHROME-DELTA-ISOMERASE-RXN DOPACHROME-DELTA-ISOMERASE-RXN]
−
* [[Tiso_gene_5379]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11404 RXN-11404]
−
** IN-SILICO_ANNOTATION
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11406 RXN-11406]
−
***EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11408 RXN-11408]
−
** EXPERIMENTAL_ANNOTATION
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11444 RXN-11444]
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5046]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[manual]]
+
−
** Source: [[manual-primary_network]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-2759}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23540 23540]
+
{{#set: taxonomic range=TAX-2}}
−
* LIGAND-RXN:
+
{{#set: common name=eumelanin biosynthesis}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05578 R05578]
+
{{#set: common name=melanochrome biosynthesis|melanogenesis}}
−
* UNIPROT:
+
{{#set: reaction found=1}}
−
** [http://www.uniprot.org/uniprot/P47700 P47700]
+
{{#set: total reaction=6}}
−
** [http://www.uniprot.org/uniprot/O52914 O52914]
+
{{#set: completion rate=17.0}}
−
** [http://www.uniprot.org/uniprot/P43818 P43818]
+
−
** [http://www.uniprot.org/uniprot/O26157 O26157]
+
−
** [http://www.uniprot.org/uniprot/Q9ZLJ1 Q9ZLJ1]
+
−
** [http://www.uniprot.org/uniprot/O25360 O25360]
+
−
** [http://www.uniprot.org/uniprot/O51345 O51345]
+
−
** [http://www.uniprot.org/uniprot/Q9Z7Z3 Q9Z7Z3]
+
−
** [http://www.uniprot.org/uniprot/P96551 P96551]
+
−
** [http://www.uniprot.org/uniprot/O67271 O67271]
+
−
** [http://www.uniprot.org/uniprot/O83679 O83679]
+
−
** [http://www.uniprot.org/uniprot/Q9ZLZ7 Q9ZLZ7]
+
−
** [http://www.uniprot.org/uniprot/Q9PP78 Q9PP78]
+
−
** [http://www.uniprot.org/uniprot/Q9CDZ7 Q9CDZ7]
+
−
** [http://www.uniprot.org/uniprot/O84451 O84451]
+
−
** [http://www.uniprot.org/uniprot/Q9X2I8 Q9X2I8]
+
−
** [http://www.uniprot.org/uniprot/Q9JWT4 Q9JWT4]
+
−
** [http://www.uniprot.org/uniprot/Q9ZDK3 Q9ZDK3]
+
−
** [http://www.uniprot.org/uniprot/Q9X172 Q9X172]
+
−
** [http://www.uniprot.org/uniprot/Q58772 Q58772]
+
−
** [http://www.uniprot.org/uniprot/Q9ZCT8 Q9ZCT8]
+
−
** [http://www.uniprot.org/uniprot/P59690 P59690]
+
−
** [http://www.uniprot.org/uniprot/Q43768 Q43768]
+
−
** [http://www.uniprot.org/uniprot/Q43794 Q43794]
+
−
** [http://www.uniprot.org/uniprot/P46655 P46655]
+
−
** [http://www.uniprot.org/uniprot/P48525 P48525]
+
−
** [http://www.uniprot.org/uniprot/P75114 P75114]
+
−
** [http://www.uniprot.org/uniprot/Q49061 Q49061]
+
−
** [http://www.uniprot.org/uniprot/P22249 P22249]
+
−
** [http://www.uniprot.org/uniprot/P22250 P22250]
+
−
** [http://www.uniprot.org/uniprot/P04805 P04805]
+
−
** [http://www.uniprot.org/uniprot/P07814 P07814]
+
−
** [http://www.uniprot.org/uniprot/P15189 P15189]
+
−
** [http://www.uniprot.org/uniprot/O65253 O65253]
+
−
** [http://www.uniprot.org/uniprot/O68055 O68055]
+
−
** [http://www.uniprot.org/uniprot/O68142 O68142]
+
−
** [http://www.uniprot.org/uniprot/O86528 O86528]
+
−
** [http://www.uniprot.org/uniprot/O13775 O13775]
+
−
** [http://www.uniprot.org/uniprot/Q9ZFA3 Q9ZFA3]
+
−
** [http://www.uniprot.org/uniprot/O82462 O82462]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=glutamyl-trna_synthetase}}
+
−
{{#set: ec number=EC-6.1.1.17}}
+
−
{{#set: gene associated=Tiso_gene_5379|Tiso_gene_5046}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY|PWY-5188}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:48, 21 March 2018

Pathway PWY-6498

  • taxonomic range:
  • common name:
    • eumelanin biosynthesis
  • Synonym(s):
    • melanochrome biosynthesis
    • melanogenesis

Reaction(s) found

1 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6498&oldid=43878"