Difference between revisions of "PWY-7800"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11734 RXN-11734] == * direction: ** REVERSIBLE * common name: ** acyl-coenzyme_a_oxidase ** ORF...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11734 RXN-11734] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
−
** acyl-coenzyme_a_oxidase
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** Ac/N-end rule pathway
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** ORF
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−
** acyl-_dehydrogenase
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−
** acyl-CoA_dehydrogenase
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−
* ec number:
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−
** [http://enzyme.expasy.org/EC/1.3.8.7 EC-1.3.8.7]
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* Synonym(s):
 
* Synonym(s):
 +
** N-Terminal acetylation-targeted N-End Rule pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''21''' reactions found over '''21''' reactions in the full pathway
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** 1 [[ETF-Oxidized]][c] '''+''' 1 [[Medium-Chain-234-Saturated-acyl-CoAs]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[medium-Chain-Trans-23-Dehydroacyl-CoA]][c] '''+''' 1 [[ETF-Reduced]][c]
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* [[RXN-17850]]
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* With common name(s):
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** 0 associated gene:
−
** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 a medium-chain 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 H+[c] '''<=>''' 1 a medium-chain trans-2,3-dehydroacyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-17851]]
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* [[Tiso_gene_17967]]
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** 0 associated gene:
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** IN-SILICO_ANNOTATION
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** 2 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_6475]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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* [[RXN-17852]]
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***EC-NUMBER
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** 0 associated gene:
−
* [[Tiso_gene_16631]]
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** 2 reconstruction source(s) associated:
−
** IN-SILICO_ANNOTATION
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*** [[annotation-experimental_annotation]]
−
***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_18566]]
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* [[RXN-17853]]
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** IN-SILICO_ANNOTATION
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** 0 associated gene:
−
***EC-NUMBER
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** 2 reconstruction source(s) associated:
−
* [[Tiso_gene_5991]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
−
***EC-NUMBER
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* [[RXN-17854]]
−
* [[Tiso_gene_883]]
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** 0 associated gene:
−
** EXPERIMENTAL_ANNOTATION
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** 2 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
−
== Pathways  ==
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*** [[annotation-in-silico_annotation]]
−
== Reconstruction information  ==
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* [[RXN-17855]]
−
* [[annotation]]:
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** 0 associated gene:
−
** [[pathwaytools]]:
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** 2 reconstruction source(s) associated:
−
*** [[experimental_annotation]]
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*** [[annotation-experimental_annotation]]
−
*** [[in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
 +
* [[RXN-17856]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-17857]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-17858]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-17859]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-17860]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-17861]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-17862]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-17863]]
 +
** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-17864]]
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** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-17873]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_4247]]
 +
*** [[Tiso_gene_5715]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-17874]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_4247]]
 +
*** [[Tiso_gene_5715]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-17875]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_4247]]
 +
*** [[Tiso_gene_5715]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-17876]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_5715]]
 +
*** [[Tiso_gene_4247]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-17877]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_5715]]
 +
*** [[Tiso_gene_4247]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-17878]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_4247]]
 +
*** [[Tiso_gene_5715]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
{{#set: taxonomic range=TAX-2759}}
−
{{#set: common name=acyl-coenzyme_a_oxidase}}
+
{{#set: common name=Ac/N-end rule pathway}}
−
{{#set: common name=ORF}}
+
{{#set: common name=N-Terminal acetylation-targeted N-End Rule pathway}}
−
{{#set: common name=acyl-_dehydrogenase}}
+
{{#set: reaction found=21}}
−
{{#set: common name=acyl-CoA_dehydrogenase}}
+
{{#set: total reaction=21}}
−
{{#set: ec number=EC-1.3.8.7}}
+
{{#set: completion rate=100.0}}
−
{{#set: gene associated=Tiso_gene_17967|Tiso_gene_6475|Tiso_gene_16631|Tiso_gene_18566|Tiso_gene_5991|Tiso_gene_883}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:48, 21 March 2018

Pathway PWY-7800

  • taxonomic range:
  • common name:
    • Ac/N-end rule pathway
  • Synonym(s):
    • N-Terminal acetylation-targeted N-End Rule pathway

Reaction(s) found

21 reactions found over 21 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7800&oldid=43907"