Difference between revisions of "Tiso gene 7852"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11734 RXN-11734] == * direction: ** REVERSIBLE * common name: ** acyl-coenzyme_a_oxidase ** ORF...")
(Created page with "Category:Gene == Gene Tiso_gene_7852 == * right end position: ** 1891 * transcription direction: ** POSITIVE * left end position: ** 161 * centisome position: ** 0.9847697...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11734 RXN-11734] ==
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== Gene Tiso_gene_7852 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 1891
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* common name:
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* transcription direction:
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** acyl-coenzyme_a_oxidase
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** POSITIVE
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** ORF
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* left end position:
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** acyl-_dehydrogenase
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** 161
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** acyl-CoA_dehydrogenase
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* centisome position:
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* ec number:
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** 0.9847697   
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** [http://enzyme.expasy.org/EC/1.3.8.7 EC-1.3.8.7]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACSERLY-RXN]]
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** 1 [[Medium-Chain-234-Saturated-acyl-CoAs]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[medium-Chain-Trans-23-Dehydroacyl-CoA]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a medium-chain 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''<=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 a medium-chain trans-2,3-dehydroacyl-CoA[c]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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== Genes associated with this reaction  ==
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* Reaction: [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_6475]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
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***EC-NUMBER
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* Reaction: [[RXN-12726]]
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* [[Tiso_gene_16631]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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** Source: [[orthology-athaliana]]
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* [[Tiso_gene_17967]]
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** Source: [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
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* Reaction: [[SULFOCYS-RXN]]
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* [[Tiso_gene_18566]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5991]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_883]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pathwaytools]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[HOMOCYSDEGR-PWY]]
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* [[CYSTSYN-PWY]]
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* [[PWY-801]]
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* [[PWY-6936]]
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* [[PWY-I9]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: right end position=1891}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ORF}}
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{{#set: left end position=161}}
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{{#set: common name=acyl-_dehydrogenase}}
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{{#set: centisome position=0.9847697    }}
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{{#set: common name=acyl-CoA_dehydrogenase}}
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{{#set: reaction associated=ACSERLY-RXN|CYSTATHIONINE-BETA-SYNTHASE-RXN|RXN-12726|SULFOCYS-RXN}}
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{{#set: ec number=EC-1.3.8.7}}
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{{#set: pathway associated=HOMOCYSDEGR-PWY|CYSTSYN-PWY|PWY-801|PWY-6936|PWY-I9}}
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{{#set: gene associated=Tiso_gene_6475|Tiso_gene_16631|Tiso_gene_17967|Tiso_gene_18566|Tiso_gene_5991|Tiso_gene_883}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:48, 21 March 2018

Gene Tiso_gene_7852

  • right end position:
    • 1891
  • transcription direction:
    • POSITIVE
  • left end position:
    • 161
  • centisome position:
    • 0.9847697
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7852&oldid=43913"