Difference between revisions of "PRACH"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRACH PRACH] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosyl-AMP cyclohydrolase,...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRACH PRACH] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** ceramide de novo biosynthesis
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** phosphoribosyl-AMP cyclohydrolase, cytosol
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''4''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[3-DEHYDROSPHINGANINE-REDUCTASE-RXN]]
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** 1.0 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_18518]]
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** 1.0 1-(5-phospho-β-D-ribosyl)-AMP[c] '''+''' 1.0 H2O[c] '''=>''' 1.0 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-16332]]
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* Gene: [[Tiso_gene_11297]]
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** 0 associated gene:
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** Source: [[orthology-creinhardtii]]
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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* [[RXN3DJ-118]]
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* Category: [[orthology]]
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** 0 associated gene:
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** Source: [[orthology-creinhardtii]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[annotation-in-silico_annotation]]
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* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_10992]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ceramide de novo biosynthesis}}
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{{#set: common name=phosphoribosyl-AMP cyclohydrolase, cytosol}}
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{{#set: reaction found=4}}
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{{#set: gene associated=Tiso_gene_11297}}
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{{#set: total reaction=4}}
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{{#set: in pathway=}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:48, 21 March 2018

Reaction PRACH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphoribosyl-AMP cyclohydrolase, cytosol
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 1-(5-phospho-β-D-ribosyl)-AMP[c] + 1.0 H2O[c] => 1.0 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PRACH&oldid=43915"