Difference between revisions of "Lichenin"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] == * direction: ** LEFT-TO-RIGHT * common name: ** oxidoreductase ** ORF * ec...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Lichenin Lichenin] == * common name: ** lichenan * Synonym(s): ** lichenin ** moss starch == R...")
 
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Lichenin Lichenin] ==
* direction:
+
** LEFT-TO-RIGHT
+
 
* common name:
 
* common name:
** oxidoreductase
+
** lichenan
** ORF
+
* ec number:
+
** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** lichenin
 +
** moss starch
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
* [[3.2.1.73-RXN]]
** 1 [[WATER]][c] '''+''' 1 [[CPD0-2354]][c] '''=>''' 1 [[tRNA-fragment]][c] '''+''' 1 [[tRNAs]][c]
+
== Reaction(s) known to produce the compound ==
* With common name(s):
+
== Reaction(s) of unknown directionality ==
** 1 H2O[c] '''+''' 1 a tRNA precursor with a 5' extension[c] '''=>''' 1 a tRNA fragment[c] '''+''' 1 an uncharged tRNA[c]
+
 
+
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* Gene: [[Tiso_gene_14344]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
* Gene: [[Tiso_gene_10971]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
* Gene: [[Tiso_gene_10972]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
+
* Gene: [[Tiso_gene_3898]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
* Gene: [[Tiso_gene_14345]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Assignment: EC-NUMBER
+
== Pathways  ==
+
* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
+
** '''4''' reactions found over '''10''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[orthology]]
+
** Source: [[orthology-esiliculosus]]
+
*** Tool: [[pantograph]]
+
* Category: [[annotation]]
+
** Source: [[annotation-in-silico_annotation]]
+
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=lichenan}}
{{#set: common name=oxidoreductase}}
+
{{#set: common name=lichenin|moss starch}}
{{#set: common name=ORF}}
+
{{#set: consumed by=3.2.1.73-RXN}}
{{#set: ec number=EC-3.1.26.5}}
+
{{#set: gene associated=Tiso_gene_14344|Tiso_gene_10971|Tiso_gene_10972|Tiso_gene_3898|Tiso_gene_14345}}
+
{{#set: in pathway=PWY0-1479}}
+
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:49, 21 March 2018

Metabolite Lichenin

  • common name:
    • lichenan
  • Synonym(s):
    • lichenin
    • moss starch

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links