Difference between revisions of "Tiso gene 16478"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
(Created page with "Category:Gene == Gene Tiso_gene_16478 == * right end position: ** 4285 * transcription direction: ** POSITIVE * left end position: ** 1084 * centisome position: ** 25.0115...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY] ==
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== Gene Tiso_gene_16478 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** 4285
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** POSITIVE
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* common name:
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* left end position:
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** spermidine biosynthesis I
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** 1084
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* centisome position:
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** 25.011536   
 
* Synonym(s):
 
* Synonym(s):
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** arginine degradation to spermidine
 
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** spermidine biosynthesis
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''2''' reactions found over '''2''' reactions in the full pathway
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* Reaction: [[ATPASE-RXN]]
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* [[SAMDECARB-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_11030]]
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_4269]]
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* Reaction: [[ATPPH]]
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** 3 reconstruction source(s) associated:
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** Source: [[orthology-creinhardtii]]
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*** [[orthology-athaliana]]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** Assignment: ec-number
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* [[SPERMIDINESYN-RXN]]
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* Reaction: [[RXN-12195]]
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** 4 associated gene(s):
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_16718]]
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*** Assignment: ec-number
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*** [[Tiso_gene_17803]]
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* Reaction: [[RXN-12196]]
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*** [[Tiso_gene_17081]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_16717]]
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*** Assignment: ec-number
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** 4 reconstruction source(s) associated:
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* Reaction: [[RXN0-5462]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: ec-number
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*** [[orthology-creinhardtii]]
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== Pathways associated ==
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*** [[orthology-esiliculosus]]
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* [[PWY-7184]]
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== Reaction(s) not found ==
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: right end position=4285}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
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{{#set: transcription direction=POSITIVE}}
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* ARACYC:
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{{#set: left end position=1084}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
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{{#set: centisome position=25.011536    }}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: reaction associated=ATPASE-RXN|ATPPH|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=spermidine biosynthesis I}}
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{{#set: common name=arginine degradation to spermidine|spermidine biosynthesis}}
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{{#set: reaction found=2}}
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{{#set: total reaction=2}}
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{{#set: completion rate=100.0}}
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Latest revision as of 19:49, 21 March 2018

Gene Tiso_gene_16478

  • right end position:
    • 4285
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1084
  • centisome position:
    • 25.011536
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16478&oldid=43954"