Difference between revisions of "Tiso gene 16478"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5183 RXN0-5183] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha-glucosidase * ec numb...")
 
(Created page with "Category:Gene == Gene Tiso_gene_16478 == * right end position: ** 4285 * transcription direction: ** POSITIVE * left end position: ** 1084 * centisome position: ** 25.0115...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5183 RXN0-5183] ==
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== Gene Tiso_gene_16478 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4285
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* common name:
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* transcription direction:
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** alpha-glucosidase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.2.1.20 EC-3.2.1.20]
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** 1084
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* centisome position:
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** 25.011536   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[MALTOTRIOSE]][c] '''=>''' 1 [[MALTOSE]][c] '''+''' 1 [[Glucopyranose]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 maltotriose[c] '''=>''' 1 maltose[c] '''+''' 1 D-glucopyranose[c]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[ATPPH]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[Tiso_gene_4953]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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* [[Tiso_gene_599]]
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* Reaction: [[RXN-12195]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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* [[Tiso_gene_4952]]
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* Reaction: [[RXN-12196]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_600]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN0-5462]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** Assignment: ec-number
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* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
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== Pathways associated ==
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7184]]
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== Reconstruction information  ==
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* [[PWY-7198]]
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* [[orthology]]:
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* [[PWY-6545]]
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** [[pantograph]]:
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* [[PWY-7210]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=4285}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27970 27970]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=1084}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05196 R05196]
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{{#set: centisome position=25.011536    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ATPASE-RXN|ATPPH|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: common name=alpha-glucosidase}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: ec number=EC-3.2.1.20}}
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{{#set: gene associated=Tiso_gene_4953|Tiso_gene_599|Tiso_gene_4952|Tiso_gene_600}}
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{{#set: in pathway=GLYCOCAT-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:49, 21 March 2018

Gene Tiso_gene_16478

  • right end position:
    • 4285
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1084
  • centisome position:
    • 25.011536
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16478&oldid=43954"