Difference between revisions of "Tiso gene 5176"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3142 RXN-3142] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Gene == Gene Tiso_gene_5176 == * right end position: ** 2201 * transcription direction: ** POSITIVE * left end position: ** 631 * centisome position: ** 4.567499...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3142 RXN-3142] ==
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== Gene Tiso_gene_5176 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2201
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1.170 EC-2.3.1.170]
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** POSITIVE
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* left end position:
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** 631
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* centisome position:
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** 4.567499   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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** 3 [[MALONYL-COA]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 4 [[PROTON]][c] '''=>''' 1 [[CPD-3041]][c] '''+''' 4 [[CO-A]][c] '''+''' 1 [[WATER]][c] '''+''' 3 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 3 malonyl-CoA[c] '''+''' 1 NADPH[c] '''+''' 1 4-coumaroyl-CoA[c] '''+''' 4 H+[c] '''=>''' 1 isoliquiritigenin[c] '''+''' 4 coenzyme A[c] '''+''' 1 H2O[c] '''+''' 3 CO2[c] '''+''' 1 NADP+[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2613]]
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** [[pantograph]]-[[athaliana]]
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== Pathways ==
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* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2201}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10584 10584]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=631}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06568 R06568]
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{{#set: centisome position=4.567499    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R07254 R07254]
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.3.1.170}}
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{{#set: gene associated=Tiso_gene_2613}}
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{{#set: in pathway=PWY1F-FLAVSYN}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana}}
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Latest revision as of 20:49, 21 March 2018

Gene Tiso_gene_5176

  • right end position:
    • 2201
  • transcription direction:
    • POSITIVE
  • left end position:
    • 631
  • centisome position:
    • 4.567499
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5176&oldid=43957"