Difference between revisions of "RXN-13673"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4361 PWY-4361] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13673 RXN-13673] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** glutathione_s-transf...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4361 PWY-4361] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13673 RXN-13673] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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* common name:
 
* common name:
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** S-methyl-5-thio-α-D-ribose 1-phosphate degradation
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** ORF
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** glutathione_s-transferase
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** phi_class_glutathione_s-transferase
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** glutathione_s-
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* ec number:
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** [http://enzyme.expasy.org/EC/2.5.1.18 EC-2.5.1.18]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
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* [[5.3.1.23-RXN]]
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** 1 [[CPD-10806]][c] '''+''' 1 [[GLUTATHIONE]][c] '''=>''' 1 [[CPD-14704]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_3805]]
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** 1 4-hydroxy-2-nonenal[c] '''+''' 1 glutathione[c] '''=>''' 1 4-hydroxy-2-nonenal-glutathione conjugate[c]
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*** [[Tiso_gene_18341]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* Gene: [[Tiso_gene_5129]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R145-RXN R145-RXN]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R147-RXN R147-RXN]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=R82-RXN R82-RXN]
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* Gene: [[Tiso_gene_19041]]
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* [http://metacyc.org/META/NEW-IMAGE?object=R83-RXN R83-RXN]
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** Source: [[orthology-esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13072 RXN-13072]
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* Gene: [[Tiso_gene_8389]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15650 RXN-15650]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_2775]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_3233]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_1104]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_8508]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_6036]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_19791]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_8509]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_20110]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7112]], 4-hydroxy-2-nonenal detoxification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7112 PWY-7112]
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** '''2''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33208}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=ORF}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=glutathione_s-transferase}}
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{{#set: taxonomic range=TAX-3193}}
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{{#set: common name=phi_class_glutathione_s-transferase}}
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{{#set: common name=S-methyl-5-thio-α-D-ribose 1-phosphate degradation}}
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{{#set: common name=glutathione_s-}}
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{{#set: reaction found=1}}
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{{#set: ec number=EC-2.5.1.18}}
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{{#set: total reaction=7}}
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{{#set: gene associated=Tiso_gene_5129|Tiso_gene_19041|Tiso_gene_8389|Tiso_gene_2775|Tiso_gene_3233|Tiso_gene_1104|Tiso_gene_8508|Tiso_gene_6036|Tiso_gene_19791|Tiso_gene_8509|Tiso_gene_20110}}
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{{#set: completion rate=14.0}}
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{{#set: in pathway=PWY-7112}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:49, 21 March 2018

Reaction RXN-13673

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • glutathione_s-transferase
    • phi_class_glutathione_s-transferase
    • glutathione_s-
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-hydroxy-2-nonenal[c] + 1 glutathione[c] => 1 4-hydroxy-2-nonenal-glutathione conjugate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7112, 4-hydroxy-2-nonenal detoxification: PWY-7112
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13673&oldid=43986"