Difference between revisions of "P162-PWY"

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(Created page with "Category:Gene == Gene Tiso_gene_5915 == * right end position: ** 3712 * transcription direction: ** POSITIVE * left end position: ** 585 * centisome position: ** 4.5796146...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
 
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[[Category:Gene]]
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[[Category:Pathway]]
== Gene Tiso_gene_5915 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY] ==
* right end position:
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* taxonomic range:
** 3712
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-32066 TAX-32066]
** POSITIVE
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* common name:
* left end position:
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** L-glutamate degradation V (via hydroxyglutarate)
** 585
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* centisome position:
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** 4.5796146   
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* Synonym(s):
 
* Synonym(s):
 +
** L-glutamate fermentation
  
== Reactions associated ==
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== Reaction(s) found ==
* Reaction: [[GLUTAMINE--TRNA-LIGASE-RXN]]
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'''4''' reactions found over '''11''' reactions in the full pathway
** Source: [[annotation-in-silico_annotation]]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
*** Assignment: ec-number
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** 3 associated gene(s):
** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_16181]]
*** Assignment: ec-number
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*** [[Tiso_gene_15327]]
== Pathways associated ==
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*** [[Tiso_gene_17451]]
* [[TRNA-CHARGING-PWY]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[GLUTAMATE-DEHYDROGENASE-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_2337]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-11662]]
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** 7 associated gene(s):
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*** [[Tiso_gene_16703]]
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*** [[Tiso_gene_14027]]
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_14026]]
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*** [[Tiso_gene_18838]]
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*** [[Tiso_gene_18839]]
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*** [[Tiso_gene_5857]]
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** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-11667]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_5857]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ACETATE--COA-LIGASE-ADP-FORMING-RXN ACETATE--COA-LIGASE-ADP-FORMING-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=GLUTACONYL-COA-DECARBOXYLASE-RXN GLUTACONYL-COA-DECARBOXYLASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=KETOGLUTREDUCT-RXN KETOGLUTREDUCT-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R11-RXN R11-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1082 RXN-1082]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1083 RXN-1083]
 
== External links  ==
 
== External links  ==
{{#set: right end position=3712}}
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{{#set: taxonomic range=TAX-1239}}
{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-32066}}
{{#set: left end position=585}}
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{{#set: common name=L-glutamate degradation V (via hydroxyglutarate)}}
{{#set: centisome position=4.5796146    }}
+
{{#set: common name=L-glutamate fermentation}}
{{#set: reaction associated=GLUTAMINE--TRNA-LIGASE-RXN}}
+
{{#set: reaction found=4}}
{{#set: pathway associated=TRNA-CHARGING-PWY}}
+
{{#set: total reaction=11}}
 +
{{#set: completion rate=36.0}}

Latest revision as of 19:49, 21 March 2018

Pathway P162-PWY

  • taxonomic range:
  • common name:
    • L-glutamate degradation V (via hydroxyglutarate)
  • Synonym(s):
    • L-glutamate fermentation

Reaction(s) found

4 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links