Difference between revisions of "CPD0-341"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] == * direction: ** REVERSIBLE * common name: ** dna_topoisomerase ** dna...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-341 CPD0-341] == * smiles: ** C(N)(=O)CCCCC(SC(=O)CCC(=O)[O-])CCS * common name: ** S-succ...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-341 CPD0-341] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C(N)(=O)CCCCC(SC(=O)CCC(=O)[O-])CCS
 
* common name:
 
* common name:
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** dna_topoisomerase
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** S-succinyl-dihydrolipoamide
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** dna_topoisomerase1
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* inchi key:
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* ec number:
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** InChIKey=RJCJWONCSKSHES-VIFPVBQESA-M
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** [http://enzyme.expasy.org/EC/5.99.1.2 EC-5.99.1.2]
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* molecular weight:
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** 306.414   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Negatively-super-coiled-DNAs]][c] '''<=>''' 1 [[Relaxed-DNAs]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[AKGDHe2r]]
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** 1 a negatively supercoiled DNA[c] '''<=>''' 1 a relaxed DNA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_5035]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_5747]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_1739]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3425]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1740]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14333]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_5036]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_200]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_10513]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1291]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5748]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_5749]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6569]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/Q7M0H8 Q7M0H8]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657579 90657579]
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** [http://www.uniprot.org/uniprot/Q07050 Q07050]
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* HMDB : HMDB01177
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** [http://www.uniprot.org/uniprot/Q9JWZ5 Q9JWZ5]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q59046 Q59046]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17432 17432]
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** [http://www.uniprot.org/uniprot/Q9PLZ2 Q9PLZ2]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P47368 P47368]
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** [http://www.genome.jp/dbget-bin/www_bget?C01169 C01169]
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** [http://www.uniprot.org/uniprot/Q9CG80 Q9CG80]
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{{#set: smiles=C(N)(=O)CCCCC(SC(=O)CCC(=O)[O-])CCS}}
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** [http://www.uniprot.org/uniprot/P43704 P43704]
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{{#set: common name=S-succinyl-dihydrolipoamide}}
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** [http://www.uniprot.org/uniprot/P43012 P43012]
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{{#set: inchi key=InChIKey=RJCJWONCSKSHES-VIFPVBQESA-M}}
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** [http://www.uniprot.org/uniprot/P0A620 P0A620]
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{{#set: molecular weight=306.414    }}
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** [http://www.uniprot.org/uniprot/P04786 P04786]
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{{#set: reversible reaction associated=AKGDHe2r}}
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** [http://www.uniprot.org/uniprot/P13099 P13099]
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** [http://www.uniprot.org/uniprot/P06612 P06612]
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** [http://www.uniprot.org/uniprot/P11387 P11387]
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** [http://www.uniprot.org/uniprot/P07799 P07799]
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** [http://www.uniprot.org/uniprot/P93119 P93119]
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** [http://www.uniprot.org/uniprot/O13463 O13463]
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** [http://www.uniprot.org/uniprot/Q94705 Q94705]
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** [http://www.uniprot.org/uniprot/Q04750 Q04750]
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** [http://www.uniprot.org/uniprot/P14294 P14294]
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** [http://www.uniprot.org/uniprot/P30181 P30181]
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** [http://www.uniprot.org/uniprot/P34185 P34185]
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** [http://www.uniprot.org/uniprot/P30189 P30189]
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** [http://www.uniprot.org/uniprot/P40114 P40114]
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** [http://www.uniprot.org/uniprot/P41511 P41511]
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** [http://www.uniprot.org/uniprot/Q8I3Z9 Q8I3Z9]
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** [http://www.uniprot.org/uniprot/Q26024 Q26024]
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** [http://www.uniprot.org/uniprot/Q27529 Q27529]
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** [http://www.uniprot.org/uniprot/P41512 P41512]
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** [http://www.uniprot.org/uniprot/O24307 O24307]
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** [http://www.uniprot.org/uniprot/P71196 P71196]
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** [http://www.uniprot.org/uniprot/O70157 O70157]
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** [http://www.uniprot.org/uniprot/O60126 O60126]
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** [http://www.uniprot.org/uniprot/O61660 O61660]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=dna_topoisomerase}}
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{{#set: common name=dna_topoisomerase1}}
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{{#set: ec number=EC-5.99.1.2}}
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{{#set: gene associated=Tiso_gene_5035|Tiso_gene_5747|Tiso_gene_1739|Tiso_gene_3425|Tiso_gene_1740|Tiso_gene_14333|Tiso_gene_5036|Tiso_gene_200|Tiso_gene_10513|Tiso_gene_1291|Tiso_gene_5748|Tiso_gene_5749|Tiso_gene_6569}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:50, 21 March 2018

Metabolite CPD0-341

  • smiles:
    • C(N)(=O)CCCCC(SC(=O)CCC(=O)[O-])CCS
  • common name:
    • S-succinyl-dihydrolipoamide
  • inchi key:
    • InChIKey=RJCJWONCSKSHES-VIFPVBQESA-M
  • molecular weight:
    • 306.414
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(N)(=O)CCCCC(SC(=O)CCC(=O)[O-])CCS" cannot be used as a page name in this wiki.



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