Difference between revisions of "Tiso gene 4020"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6908 PWY-6908] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Gene == Gene Tiso_gene_4020 == * right end position: ** 10646 * transcription direction: ** NEGATIVE * left end position: ** 9202 * centisome position: ** 59.0894...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6908 PWY-6908] ==
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== Gene Tiso_gene_4020 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** 10646
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33630 TAX-33630]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** NEGATIVE
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* common name:
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* left end position:
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** thiamine diphosphate biosynthesis IV (eukaryotes)
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** 9202
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* centisome position:
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** 59.08945   
 
* Synonym(s):
 
* Synonym(s):
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** thiamin diphosphate biosynthesis IV (eukaryotes)
 
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** vitamin B1 biosynthesis IV (eukaryotes)
 
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** thiamine diphosphate biosynthesis (plants)
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''3''' reactions found over '''3''' reactions in the full pathway
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* Reaction: [[RXN-11839]]
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* [[RXNQT-4191]]
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** Source: [[annotation-in-silico_annotation]]
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** 5 associated gene(s):
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*** Assignment: automated-name-match
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*** [[Tiso_gene_17610]]
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* Reaction: [[RXN-11840]]
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*** [[Tiso_gene_4497]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_15256]]
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*** Assignment: automated-name-match
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*** [[Tiso_gene_17625]]
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* Reaction: [[RXN-11841]]
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*** [[Tiso_gene_11838]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 reconstruction source(s) associated:
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*** Assignment: automated-name-match
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*** [[orthology-esiliculosus]]
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* Reaction: [[RXN-11842]]
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* [[THI-P-SYN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 3 associated gene(s):
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*** Assignment: automated-name-match
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*** [[Tiso_gene_10320]]
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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*** [[Tiso_gene_2159]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_2160]]
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*** Assignment: ec-number
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** 3 reconstruction source(s) associated:
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== Pathways associated ==
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[THIAMIN-PYROPHOSPHOKINASE-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_16512]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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{{#set: right end position=10646}}
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{{#set: taxonomic range=TAX-33630}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: left end position=9202}}
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{{#set: common name=thiamine diphosphate biosynthesis IV (eukaryotes)}}
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{{#set: centisome position=59.08945    }}
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{{#set: common name=thiamin diphosphate biosynthesis IV (eukaryotes)|vitamin B1 biosynthesis IV (eukaryotes)|thiamine diphosphate biosynthesis (plants)}}
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{{#set: reaction associated=RXN-11839|RXN-11840|RXN-11841|RXN-11842|TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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{{#set: reaction found=3}}
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{{#set: total reaction=3}}
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{{#set: completion rate=100.0}}
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Latest revision as of 20:50, 21 March 2018

Gene Tiso_gene_4020

  • right end position:
    • 10646
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 9202
  • centisome position:
    • 59.08945
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4020&oldid=44078"