Difference between revisions of "Tiso gene 12221"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12693 RXN-12693] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-beta_hydroxysteroid_dehyd...")
(Created page with "Category:Gene == Gene Tiso_gene_12221 == * right end position: ** 4337 * transcription direction: ** POSITIVE * left end position: ** 2731 * centisome position: ** 37.8621...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12693 RXN-12693] ==
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== Gene Tiso_gene_12221 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4337
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* common name:
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* transcription direction:
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** 3-beta_hydroxysteroid_dehydrogenase_isomerase
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** POSITIVE
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** ORF
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* left end position:
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* ec number:
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** 2731
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** [http://enzyme.expasy.org/EC/1.1.1.145 EC-1.1.1.145]
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* centisome position:
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** 37.862194   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.1.1.77-RXN]]
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** 1 [[CHOLESTEROL]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-13684]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 cholesterol[c] '''+''' 1 NAD+[c] '''=>''' 1 cholest-5-en-3-one[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2957]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11016]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_897]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18774]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-6946]], cholesterol degradation to androstenedione II (cholesterol dehydrogenase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6946 PWY-6946]
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** '''3''' reactions found over '''22''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4337}}
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{{#set: common name=3-beta_hydroxysteroid_dehydrogenase_isomerase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ORF}}
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{{#set: left end position=2731}}
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{{#set: ec number=EC-1.1.1.145}}
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{{#set: centisome position=37.862194    }}
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{{#set: gene associated=Tiso_gene_2957|Tiso_gene_11016|Tiso_gene_897|Tiso_gene_18774}}
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{{#set: reaction associated=2.1.1.77-RXN}}
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{{#set: in pathway=PWY-6946}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:50, 21 March 2018

Gene Tiso_gene_12221

  • right end position:
    • 4337
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2731
  • centisome position:
    • 37.862194
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12221&oldid=44089"