Difference between revisions of "DMHL"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DMHL DMHL] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,3-Dihydroxy-3-methylbutanoate hydro...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DMHL DMHL] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** fatty acid β-oxidation II (peroxisome)
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** 2,3-Dihydroxy-3-methylbutanoate hydro-lyase
 
* Synonym(s):
 
* Synonym(s):
** fatty acid β-oxidation II (plants)
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''5''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
* [[ACYLCOASYN-RXN]]
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** 1.0 [[CPD-13357]][m] '''=>''' 1.0 [[2-KETO-ISOVALERATE]][m] '''+''' 1.0 [[WATER]][m]
** 9 associated gene(s):
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* With common name(s):
*** [[Tiso_gene_10876]]
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** 1.0 (2R)-2,3-dihydroxy-3-methylbutanoate[m] '''=>''' 1.0 3-methyl-2-oxobutanoate[m] '''+''' 1.0 H2O[m]
*** [[Tiso_gene_136]]
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*** [[Tiso_gene_4191]]
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== Genes associated with this reaction  ==
*** [[Tiso_gene_7855]]
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Genes have been associated with this reaction based on different elements listed below.
*** [[Tiso_gene_13394]]
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* Gene: [[Tiso_gene_1563]]
*** [[Tiso_gene_500]]
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** Source: [[orthology-creinhardtii]]
*** [[Tiso_gene_9394]]
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== Pathways  ==
*** [[Tiso_gene_348]]
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== Reconstruction information  ==
*** [[Tiso_gene_135]]
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* Category: [[orthology]]
** 3 reconstruction source(s) associated:
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** Source: [[orthology-creinhardtii]]
*** [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ENOYL-COA-HYDRAT-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_16145]]
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*** [[Tiso_gene_6885]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[KETOACYLCOATHIOL-RXN]]
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** 5 associated gene(s):
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*** [[Tiso_gene_17451]]
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*** [[Tiso_gene_3856]]
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*** [[Tiso_gene_3855]]
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*** [[Tiso_gene_10116]]
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*** [[Tiso_gene_15327]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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* [[OHACYL-COA-DEHYDROG-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_14027]]
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*** [[Tiso_gene_18838]]
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*** [[Tiso_gene_18839]]
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*** [[Tiso_gene_14026]]
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*** [[Tiso_gene_5857]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-11026]]
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** 1 associated gene(s):
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*** [[Tiso_gene_18566]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
* METACYC:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=PWY-5136 PWY-5136]
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{{#set: common name=2,3-Dihydroxy-3-methylbutanoate hydro-lyase}}
* ARACYC:
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{{#set: gene associated=Tiso_gene_1563}}
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5136 PWY-5136]
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{{#set: in pathway=}}
{{#set: taxonomic range=TAX-33090}}
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{{#set: reconstruction category=orthology}}
{{#set: common name=fatty acid β-oxidation II (peroxisome)}}
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{{#set: reconstruction source=orthology-creinhardtii}}
{{#set: common name=fatty acid β-oxidation II (plants)}}
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{{#set: reconstruction tool=pantograph}}
{{#set: reaction found=5}}
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{{#set: total reaction=5}}
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{{#set: completion rate=100.0}}
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Latest revision as of 20:50, 21 March 2018

Reaction DMHL

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2,3-Dihydroxy-3-methylbutanoate hydro-lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 (2R)-2,3-dihydroxy-3-methylbutanoate[m] => 1.0 3-methyl-2-oxobutanoate[m] + 1.0 H2O[m]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links