Difference between revisions of "R00357"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5-NUCLEOTID-RXN 5-NUCLEOTID-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 5_-nucleotidase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R00357 R00357] == * direction: ** LEFT-TO-RIGHT * common name: ** R526 * Synonym(s): == Reaction F...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5-NUCLEOTID-RXN 5-NUCLEOTID-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R00357 R00357] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 5_-nucleotidase
+
** R526
−
** 5_deoxy_cytosolic_type_c_protein
+
−
** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
+
−
** ORF
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[Ribonucleoside-Monophosphates]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Ribonucleosides]][c]
+
** 1.0 [[OXYGEN-MOLECULE]][c] '''+''' 1.0 [[WATER]][c] '''+''' 1.0 [[L-ASPARTATE]][c] '''=>''' 1.0 [[AMMONIA]][c] '''+''' 1.0 [[OXALACETIC_ACID]][c] '''+''' 1.0 [[HYDROGEN-PEROXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a ribonucleoside 5'-monophosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 a ribonucleoside[c]
+
** 1.0 oxygen[c] '''+''' 1.0 H2O[c] '''+''' 1.0 L-aspartate[c] '''=>''' 1.0 ammonia[c] '''+''' 1.0 oxaloacetate[c] '''+''' 1.0 hydrogen peroxide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5911]]
+
* Gene: [[Tiso_gene_19435]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-synechocystis]]
−
***AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_16968]]
−
* [[Tiso_gene_14435]]
+
** Source: [[orthology-synechocystis]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_7285]]
−
***EC-NUMBER
+
** Source: [[orthology-synechocystis]]
−
* [[Tiso_gene_14434]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6988]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14246]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6640]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13929]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-synechocystis]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R07297 R07297]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P06196 P06196]
 
−
** [http://www.uniprot.org/uniprot/P21588 P21588]
 
−
** [http://www.uniprot.org/uniprot/O34313 O34313]
 
−
** [http://www.uniprot.org/uniprot/Q9KM44 Q9KM44]
 
−
** [http://www.uniprot.org/uniprot/O29385 O29385]
 
−
** [http://www.uniprot.org/uniprot/P44569 P44569]
 
−
** [http://www.uniprot.org/uniprot/O83142 O83142]
 
−
** [http://www.uniprot.org/uniprot/P49902 P49902]
 
−
** [http://www.uniprot.org/uniprot/P22848 P22848]
 
−
** [http://www.uniprot.org/uniprot/Q05927 Q05927]
 
−
** [http://www.uniprot.org/uniprot/P21589 P21589]
 
−
** [http://www.uniprot.org/uniprot/P29240 P29240]
 
−
** [http://www.uniprot.org/uniprot/P07024 P07024]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=5_-nucleotidase}}
+
{{#set: common name=R526}}
−
{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
+
{{#set: gene associated=Tiso_gene_19435|Tiso_gene_16968|Tiso_gene_7285}}
−
{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-3.1.3.5}}
+
−
{{#set: gene associated=Tiso_gene_5911|Tiso_gene_14435|Tiso_gene_14434|Tiso_gene_6988|Tiso_gene_14246|Tiso_gene_6640|Tiso_gene_13929}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-synechocystis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:50, 21 March 2018

Reaction R00357

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • R526
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=R00357&oldid=44110"