Difference between revisions of "CIT"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.22.4-RXN 3.1.22.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** structure-specific_en...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CIT CIT] == * smiles: ** C(=O)([O-])CC(C(=O)[O-])(O)CC(=O)[O-] * common name: ** citrate * inch...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.22.4-RXN 3.1.22.4-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CIT CIT] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(=O)([O-])CC(C(=O)[O-])(O)CC(=O)[O-]
 
* common name:
 
* common name:
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** structure-specific_endonuclease_subunit_slx1_homolog
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** citrate
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/3.1.22.4 EC-3.1.22.4]
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** InChIKey=KRKNYBCHXYNGOX-UHFFFAOYSA-K
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* molecular weight:
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** 189.101   
 
* Synonym(s):
 
* Synonym(s):
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** citr
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** cit
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** citric acid
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** 2-hydroxy-1,2,3-propanetricarboxylic acid
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[DNA-Combined-With-Exogenous-DNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Resolution-of-Recombinational-Junction]][c]
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* [[CSm]]
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* With common name(s):
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* [[CSx]]
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** 1 DNA combined with exogenous DNA to form a recombinational junction[c] '''+''' 1 H2O[c] '''=>''' 1 resolution of recombinational junction formation of two intact strands[c]
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* [[CITSYN-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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* [[RXN-14047]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[OAACITtm]]
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* [[Tiso_gene_11797]]
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* [[AKGCITtm]]
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** IN-SILICO_ANNOTATION
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* [[ACONITATEDEHYDR-RXN]]
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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* CAS : 77-92-9
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** [http://www.uniprot.org/uniprot/P0A814 P0A814]
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* BIGG : cit
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** [http://www.uniprot.org/uniprot/P44633 P44633]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/O83530 O83530]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=31348 31348]
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** [http://www.uniprot.org/uniprot/O84510 O84510]
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* KNAPSACK : C00007619
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** [http://www.uniprot.org/uniprot/O25544 O25544]
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* HMDB : HMDB00094
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** [http://www.uniprot.org/uniprot/Q9PLU8 Q9PLU8]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q51424 Q51424]
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** [http://www.genome.jp/dbget-bin/www_bget?C00158 C00158]
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** [http://www.uniprot.org/uniprot/Q37873 Q37873]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P0AG74 P0AG74]
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** [http://www.chemspider.com/Chemical-Structure.29081.html 29081]
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** [http://www.uniprot.org/uniprot/Q55506 Q55506]
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* CHEBI:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16947 16947]
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{{#set: common name=structure-specific_endonuclease_subunit_slx1_homolog}}
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* METABOLIGHTS : MTBLC16947
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{{#set: ec number=EC-3.1.22.4}}
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{{#set: smiles=C(=O)([O-])CC(C(=O)[O-])(O)CC(=O)[O-]}}
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{{#set: gene associated=Tiso_gene_11797}}
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{{#set: common name=citrate}}
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{{#set: in pathway=}}
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{{#set: inchi key=InChIKey=KRKNYBCHXYNGOX-UHFFFAOYSA-K}}
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{{#set: reconstruction category=annotation}}
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{{#set: molecular weight=189.101    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=citr|cit|citric acid|2-hydroxy-1,2,3-propanetricarboxylic acid}}
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: produced by=CSm|CSx|CITSYN-RXN}}
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{{#set: reversible reaction associated=RXN-14047|OAACITtm|AKGCITtm|ACONITATEDEHYDR-RXN}}

Latest revision as of 20:51, 21 March 2018

Metabolite CIT

  • smiles:
    • C(=O)([O-])CC(C(=O)[O-])(O)CC(=O)[O-]
  • common name:
    • citrate
  • inchi key:
    • InChIKey=KRKNYBCHXYNGOX-UHFFFAOYSA-K
  • molecular weight:
    • 189.101
  • Synonym(s):
    • citr
    • cit
    • citric acid
    • 2-hydroxy-1,2,3-propanetricarboxylic acid

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 77-92-9
  • BIGG : cit
  • PUBCHEM:
  • KNAPSACK : C00007619
  • HMDB : HMDB00094
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC16947
"C(=O)([O-])CC(C(=O)[O-])(O)CC(=O)[O-" cannot be used as a page name in this wiki.




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